Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cldn18P56857 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn18P56857 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn18P56857 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.16■□□□□ 0.34
Cldn18P56857 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn18P56857 Gm38205-201ENSMUST00000192243 258 ntBASIC17.16■□□□□ 0.34
Cldn18P56857 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn18P56857 Gm5874-201ENSMUST00000096101 508 ntBASIC17.16■□□□□ 0.34
Cldn18P56857 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn18P56857 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn18P56857 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn18P56857 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn18P56857 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn18P56857 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn18P56857 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn18P56857 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn18P56857 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn18P56857 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cldn18P56857 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.15■□□□□ 0.34
Cldn18P56857 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn18P56857 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn18P56857 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn18P56857 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Cldn18P56857 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cldn18P56857 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.14■□□□□ 0.33
Cldn18P56857 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Cldn18P56857 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.14■□□□□ 0.33
Cldn18P56857 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
Cldn18P56857 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn18P56857 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.14■□□□□ 0.33
Cldn18P56857 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cldn18P56857 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn18P56857 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn18P56857 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn18P56857 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn18P56857 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn18P56857 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn18P56857 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Cldn18P56857 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.12■□□□□ 0.33
Cldn18P56857 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn18P56857 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cldn18P56857 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn18P56857 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn18P56857 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn18P56857 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn18P56857 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Cldn18P56857 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cldn18P56857 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn18P56857 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn18P56857 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cldn18P56857 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn18P56857 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn18P56857 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn18P56857 Gm13234-201ENSMUST00000120010 747 ntBASIC17.11■□□□□ 0.33
Cldn18P56857 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn18P56857 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn18P56857 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn18P56857 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn18P56857 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Cldn18P56857 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn18P56857 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn18P56857 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Cldn18P56857 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn18P56857 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn18P56857 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.1■□□□□ 0.33
Cldn18P56857 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
Cldn18P56857 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cldn18P56857 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.1■□□□□ 0.33
Cldn18P56857 Gm8495-201ENSMUST00000188740 694 ntBASIC17.1■□□□□ 0.33
Cldn18P56857 Gm42778-201ENSMUST00000199644 553 ntBASIC17.1■□□□□ 0.33
Cldn18P56857 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.1■□□□□ 0.33
Cldn18P56857 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Cldn18P56857 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn18P56857 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn18P56857 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn18P56857 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn18P56857 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms