Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh11P55288 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh11P55288 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdh11P55288 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh11P55288 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
Cdh11P55288 Gm8493-201ENSMUST00000196881 489 ntBASIC17.34■□□□□ 0.37
Cdh11P55288 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cdh11P55288 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh11P55288 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdh11P55288 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh11P55288 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh11P55288 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh11P55288 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh11P55288 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cdh11P55288 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.33■□□□□ 0.37
Cdh11P55288 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cdh11P55288 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh11P55288 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cdh11P55288 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh11P55288 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh11P55288 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cdh11P55288 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh11P55288 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh11P55288 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cdh11P55288 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh11P55288 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Cdh11P55288 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh11P55288 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh11P55288 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh11P55288 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdh11P55288 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh11P55288 Gm43017-201ENSMUST00000198296 752 ntBASIC17.32■□□□□ 0.36
Cdh11P55288 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh11P55288 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh11P55288 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.31■□□□□ 0.36
Cdh11P55288 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdh11P55288 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cdh11P55288 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdh11P55288 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh11P55288 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdh11P55288 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.3■□□□□ 0.36
Cdh11P55288 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh11P55288 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdh11P55288 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh11P55288 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh11P55288 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cdh11P55288 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh11P55288 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh11P55288 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Cdh11P55288 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Cdh11P55288 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.28■□□□□ 0.36
Cdh11P55288 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.28■□□□□ 0.36
Cdh11P55288 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdh11P55288 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdh11P55288 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.28■□□□□ 0.36
Cdh11P55288 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdh11P55288 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdh11P55288 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdh11P55288 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh11P55288 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh11P55288 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh11P55288 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh11P55288 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.27■□□□□ 0.36
Cdh11P55288 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh11P55288 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh11P55288 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh11P55288 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh11P55288 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.27■□□□□ 0.36
Cdh11P55288 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.27■□□□□ 0.36
Cdh11P55288 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms