Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkn2bP55271 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdkn2bP55271 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdkn2bP55271 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cdkn2bP55271 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkn2bP55271 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkn2bP55271 Gm45102-201ENSMUST00000207427 857 ntBASIC18.33■□□□□ 0.52
Cdkn2bP55271 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkn2bP55271 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkn2bP55271 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cdkn2bP55271 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkn2bP55271 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.32■□□□□ 0.52
Cdkn2bP55271 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn2bP55271 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn2bP55271 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn2bP55271 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn2bP55271 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn2bP55271 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn2bP55271 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn2bP55271 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn2bP55271 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn2bP55271 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.3■□□□□ 0.52
Cdkn2bP55271 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Gm14117-201ENSMUST00000122417 843 ntBASIC18.3■□□□□ 0.52
Cdkn2bP55271 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Cdkn2bP55271 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.3■□□□□ 0.52
Cdkn2bP55271 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.3■□□□□ 0.52
Cdkn2bP55271 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn2bP55271 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn2bP55271 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn2bP55271 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn2bP55271 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.28■□□□□ 0.52
Cdkn2bP55271 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn2bP55271 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.27■□□□□ 0.52
Cdkn2bP55271 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn2bP55271 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdkn2bP55271 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn2bP55271 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn2bP55271 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cdkn2bP55271 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cdkn2bP55271 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn2bP55271 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn2bP55271 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdkn2bP55271 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdkn2bP55271 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.27■□□□□ 0.51
Cdkn2bP55271 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Gm12922-201ENSMUST00000120626 809 ntBASIC18.26■□□□□ 0.51
Cdkn2bP55271 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn2bP55271 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn2bP55271 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms