Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox1P53783 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.66■□□□□ 0.74
Sox1P53783 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox1P53783 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox1P53783 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox1P53783 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox1P53783 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox1P53783 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox1P53783 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Sox1P53783 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox1P53783 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sox1P53783 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox1P53783 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox1P53783 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox1P53783 Gm9103-201ENSMUST00000119371 405 ntBASIC19.65■□□□□ 0.74
Sox1P53783 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.65■□□□□ 0.74
Sox1P53783 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox1P53783 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sox1P53783 Gm30025-201ENSMUST00000218555 728 ntBASIC19.65■□□□□ 0.74
Sox1P53783 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox1P53783 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sox1P53783 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox1P53783 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sox1P53783 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox1P53783 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.74
Sox1P53783 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox1P53783 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Sox1P53783 Gm44549-201ENSMUST00000208351 577 ntBASIC19.64■□□□□ 0.73
Sox1P53783 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox1P53783 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox1P53783 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Sox1P53783 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox1P53783 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sox1P53783 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox1P53783 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox1P53783 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox1P53783 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox1P53783 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Sox1P53783 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox1P53783 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox1P53783 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.62■□□□□ 0.73
Sox1P53783 Gm13559-201ENSMUST00000120476 863 ntBASIC19.62■□□□□ 0.73
Sox1P53783 Gm13158-201ENSMUST00000122007 736 ntBASIC19.62■□□□□ 0.73
Sox1P53783 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.62■□□□□ 0.73
Sox1P53783 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.62■□□□□ 0.73
Sox1P53783 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.62■□□□□ 0.73
Sox1P53783 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.62■□□□□ 0.73
Sox1P53783 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox1P53783 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox1P53783 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox1P53783 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sox1P53783 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox1P53783 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Sox1P53783 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.61■□□□□ 0.73
Sox1P53783 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox1P53783 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.61■□□□□ 0.73
Sox1P53783 Gm7461-201ENSMUST00000058918 827 ntBASIC19.61■□□□□ 0.73
Sox1P53783 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox1P53783 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox1P53783 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox1P53783 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sox1P53783 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox1P53783 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Sox1P53783 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox1P53783 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox1P53783 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox1P53783 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.6■□□□□ 0.73
Sox1P53783 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sox1P53783 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sox1P53783 Gm7889-201ENSMUST00000185591 958 ntBASIC19.6■□□□□ 0.73
Sox1P53783 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox1P53783 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.6■□□□□ 0.73
Sox1P53783 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox1P53783 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.6■□□□□ 0.73
Sox1P53783 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sox1P53783 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox1P53783 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Sox1P53783 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox1P53783 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.59■□□□□ 0.73
Sox1P53783 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Sox1P53783 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.59■□□□□ 0.73
Sox1P53783 Gm11539-201ENSMUST00000119837 557 ntBASIC19.59■□□□□ 0.73
Sox1P53783 Gm13436-201ENSMUST00000120418 567 ntBASIC19.59■□□□□ 0.73
Sox1P53783 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.59■□□□□ 0.73
Sox1P53783 Ank2-226ENSMUST00000189368 339 ntBASIC19.59■□□□□ 0.73
Sox1P53783 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.59■□□□□ 0.73
Sox1P53783 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox1P53783 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms