Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Limk1P53668 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Limk1P53668 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Limk1P53668 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.72■□□□□ 0.59
Limk1P53668 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Limk1P53668 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Limk1P53668 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Limk1P53668 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.71■□□□□ 0.59
Limk1P53668 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.71■□□□□ 0.59
Limk1P53668 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.71■□□□□ 0.59
Limk1P53668 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Limk1P53668 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Limk1P53668 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Limk1P53668 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Limk1P53668 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Limk1P53668 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Limk1P53668 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Limk1P53668 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Limk1P53668 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Limk1P53668 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.7■□□□□ 0.58
Limk1P53668 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.7■□□□□ 0.58
Limk1P53668 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Limk1P53668 Rab3c-203ENSMUST00000224180 967 ntBASIC18.7■□□□□ 0.58
Limk1P53668 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Limk1P53668 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.69■□□□□ 0.58
Limk1P53668 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Limk1P53668 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Limk1P53668 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Limk1P53668 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Limk1P53668 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Limk1P53668 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Limk1P53668 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.68■□□□□ 0.58
Limk1P53668 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Limk1P53668 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Limk1P53668 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Limk1P53668 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Limk1P53668 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Limk1P53668 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Limk1P53668 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Limk1P53668 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.68■□□□□ 0.58
Limk1P53668 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Limk1P53668 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Limk1P53668 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Limk1P53668 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Limk1P53668 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Limk1P53668 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Limk1P53668 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.67■□□□□ 0.58
Limk1P53668 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Limk1P53668 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Limk1P53668 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Limk1P53668 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Limk1P53668 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Limk1P53668 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Limk1P53668 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Limk1P53668 Golph3-202ENSMUST00000226517 2359 ntBASIC18.66■□□□□ 0.58
Limk1P53668 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.66■□□□□ 0.58
Limk1P53668 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Limk1P53668 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms