Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GdnfP48540 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.67■□□□□ 0.26
GdnfP48540 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GdnfP48540 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GdnfP48540 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GdnfP48540 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GdnfP48540 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GdnfP48540 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.66■□□□□ 0.26
GdnfP48540 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GdnfP48540 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
GdnfP48540 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GdnfP48540 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GdnfP48540 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GdnfP48540 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GdnfP48540 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GdnfP48540 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GdnfP48540 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
GdnfP48540 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GdnfP48540 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GdnfP48540 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GdnfP48540 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GdnfP48540 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GdnfP48540 Gm9847-201ENSMUST00000052528 599 ntBASIC16.65■□□□□ 0.26
GdnfP48540 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GdnfP48540 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.65■□□□□ 0.26
GdnfP48540 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.65■□□□□ 0.26
GdnfP48540 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GdnfP48540 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GdnfP48540 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GdnfP48540 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GdnfP48540 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GdnfP48540 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
GdnfP48540 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GdnfP48540 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GdnfP48540 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.64■□□□□ 0.25
GdnfP48540 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
GdnfP48540 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GdnfP48540 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.63■□□□□ 0.25
GdnfP48540 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GdnfP48540 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GdnfP48540 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GdnfP48540 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.63■□□□□ 0.25
GdnfP48540 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GdnfP48540 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GdnfP48540 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.62■□□□□ 0.25
GdnfP48540 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
GdnfP48540 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Gm21956-201ENSMUST00000179946 522 ntBASIC16.62■□□□□ 0.25
GdnfP48540 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.62■□□□□ 0.25
GdnfP48540 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.62■□□□□ 0.25
GdnfP48540 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GdnfP48540 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GdnfP48540 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Grk6-206ENSMUST00000224995 2971 ntBASIC16.61■□□□□ 0.25
GdnfP48540 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.61■□□□□ 0.25
GdnfP48540 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.61■□□□□ 0.25
GdnfP48540 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GdnfP48540 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
GdnfP48540 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
GdnfP48540 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GdnfP48540 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GdnfP48540 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GdnfP48540 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.6■□□□□ 0.25
GdnfP48540 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.6■□□□□ 0.25
GdnfP48540 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms