Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Vps4bP46467 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.33■□□□□ 0.68
Vps4bP46467 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4bP46467 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4bP46467 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4bP46467 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Vps4bP46467 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4bP46467 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4bP46467 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.32■□□□□ 0.68
Vps4bP46467 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4bP46467 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4bP46467 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Vps4bP46467 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.32■□□□□ 0.68
Vps4bP46467 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4bP46467 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4bP46467 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.32■□□□□ 0.68
Vps4bP46467 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4bP46467 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4bP46467 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vps4bP46467 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vps4bP46467 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4bP46467 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.31■□□□□ 0.68
Vps4bP46467 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4bP46467 Gm27454-201ENSMUST00000185090 204 ntBASIC19.31■□□□□ 0.68
Vps4bP46467 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4bP46467 Gm43137-201ENSMUST00000198052 594 ntBASIC19.31■□□□□ 0.68
Vps4bP46467 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vps4bP46467 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vps4bP46467 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vps4bP46467 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vps4bP46467 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4bP46467 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4bP46467 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4bP46467 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.3■□□□□ 0.68
Vps4bP46467 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Vps4bP46467 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Vps4bP46467 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.3■□□□□ 0.68
Vps4bP46467 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Vps4bP46467 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Vps4bP46467 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4bP46467 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vps4bP46467 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vps4bP46467 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Vps4bP46467 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vps4bP46467 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4bP46467 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4bP46467 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4bP46467 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Vps4bP46467 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4bP46467 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4bP46467 Gm45417-201ENSMUST00000209533 758 ntBASIC19.28■□□□□ 0.68
Vps4bP46467 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Vps4bP46467 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4bP46467 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4bP46467 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Vps4bP46467 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4bP46467 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4bP46467 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vps4bP46467 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.27■□□□□ 0.68
Vps4bP46467 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Vps4bP46467 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.27■□□□□ 0.68
Vps4bP46467 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.27■□□□□ 0.68
Vps4bP46467 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4bP46467 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
Vps4bP46467 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps4bP46467 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms