Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sox18P43680 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox18P43680 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox18P43680 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox18P43680 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sox18P43680 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox18P43680 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Sox18P43680 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox18P43680 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sox18P43680 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox18P43680 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sox18P43680 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox18P43680 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox18P43680 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox18P43680 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox18P43680 Gm12896-201ENSMUST00000118430 226 ntBASIC18.32■□□□□ 0.52
Sox18P43680 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox18P43680 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox18P43680 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox18P43680 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sox18P43680 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox18P43680 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox18P43680 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox18P43680 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox18P43680 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox18P43680 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox18P43680 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox18P43680 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sox18P43680 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox18P43680 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sox18P43680 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox18P43680 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.29■□□□□ 0.52
Sox18P43680 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.29■□□□□ 0.52
Sox18P43680 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sox18P43680 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sox18P43680 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sox18P43680 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox18P43680 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sox18P43680 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.29■□□□□ 0.52
Sox18P43680 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Sox18P43680 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.28■□□□□ 0.52
Sox18P43680 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sox18P43680 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.28■□□□□ 0.52
Sox18P43680 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.28■□□□□ 0.52
Sox18P43680 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox18P43680 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sox18P43680 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.27■□□□□ 0.52
Sox18P43680 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox18P43680 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sox18P43680 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Sox18P43680 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Sox18P43680 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.27■□□□□ 0.52
Sox18P43680 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.27■□□□□ 0.52
Sox18P43680 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.27■□□□□ 0.52
Sox18P43680 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sox18P43680 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox18P43680 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox18P43680 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox18P43680 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox18P43680 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox18P43680 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.26■□□□□ 0.51
Sox18P43680 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sox18P43680 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.26■□□□□ 0.51
Sox18P43680 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox18P43680 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox18P43680 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox18P43680 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sox18P43680 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
Sox18P43680 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Gm37055-201ENSMUST00000191866 133 ntBASIC18.25■□□□□ 0.51
Sox18P43680 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sox18P43680 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox18P43680 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms