Protein–RNA interactions for Protein: P42582

Nkx2-5, Homeobox protein Nkx-2.5, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-5P42582 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.34■□□□□ 0.85
Nkx2-5P42582 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.34■□□□□ 0.85
Nkx2-5P42582 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-5P42582 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-5P42582 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.33■□□□□ 0.85
Nkx2-5P42582 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-5P42582 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.33■□□□□ 0.85
Nkx2-5P42582 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-5P42582 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-5P42582 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Nkx2-5P42582 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-5P42582 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-5P42582 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-5P42582 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-5P42582 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-5P42582 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.32■□□□□ 0.84
Nkx2-5P42582 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-5P42582 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-5P42582 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.32■□□□□ 0.84
Nkx2-5P42582 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-5P42582 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-5P42582 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-5P42582 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-5P42582 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.31■□□□□ 0.84
Nkx2-5P42582 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nkx2-5P42582 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.31■□□□□ 0.84
Nkx2-5P42582 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-5P42582 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-5P42582 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Serp2-204ENSMUST00000228055 705 ntBASIC20.3■□□□□ 0.84
Nkx2-5P42582 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-5P42582 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-5P42582 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-5P42582 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-5P42582 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.29■□□□□ 0.84
Nkx2-5P42582 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.29■□□□□ 0.84
Nkx2-5P42582 Gm7417-201ENSMUST00000192950 473 ntBASIC20.29■□□□□ 0.84
Nkx2-5P42582 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-5P42582 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-5P42582 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Nkx2-5P42582 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Nkx2-5P42582 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Nkx2-5P42582 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-5P42582 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-5P42582 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-5P42582 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-5P42582 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.28■□□□□ 0.84
Nkx2-5P42582 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nkx2-5P42582 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-5P42582 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.27■□□□□ 0.84
Nkx2-5P42582 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-5P42582 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-5P42582 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-5P42582 Gm15820-201ENSMUST00000201566 728 ntBASIC20.27■□□□□ 0.84
Nkx2-5P42582 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.27■□□□□ 0.84
Nkx2-5P42582 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.27■□□□□ 0.84
Nkx2-5P42582 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-5P42582 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx2-5P42582 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx2-5P42582 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx2-5P42582 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.26■□□□□ 0.83
Nkx2-5P42582 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.26■□□□□ 0.83
Nkx2-5P42582 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-5P42582 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-5P42582 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-5P42582 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-5P42582 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nkx2-5P42582 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-5P42582 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-5P42582 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-5P42582 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-5P42582 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms