Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fen1P39749 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fen1P39749 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.17■□□□□ 0.66
Fen1P39749 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fen1P39749 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Fen1P39749 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fen1P39749 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Fen1P39749 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Fen1P39749 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fen1P39749 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fen1P39749 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Fen1P39749 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fen1P39749 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fen1P39749 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fen1P39749 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fen1P39749 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Fen1P39749 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.16■□□□□ 0.66
Fen1P39749 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fen1P39749 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fen1P39749 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fen1P39749 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Fen1P39749 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Fen1P39749 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.15■□□□□ 0.66
Fen1P39749 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fen1P39749 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Fen1P39749 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Fen1P39749 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Fen1P39749 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fen1P39749 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.14■□□□□ 0.65
Fen1P39749 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fen1P39749 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Fen1P39749 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fen1P39749 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fen1P39749 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fen1P39749 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Fen1P39749 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fen1P39749 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fen1P39749 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fen1P39749 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Fen1P39749 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Fen1P39749 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.13■□□□□ 0.65
Fen1P39749 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Fen1P39749 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Fen1P39749 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.13■□□□□ 0.65
Fen1P39749 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.13■□□□□ 0.65
Fen1P39749 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.13■□□□□ 0.65
Fen1P39749 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.13■□□□□ 0.65
Fen1P39749 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fen1P39749 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Fen1P39749 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fen1P39749 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fen1P39749 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.12■□□□□ 0.65
Fen1P39749 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fen1P39749 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Fen1P39749 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fen1P39749 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Fen1P39749 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Fen1P39749 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.12■□□□□ 0.65
Fen1P39749 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Fen1P39749 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Fen1P39749 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fen1P39749 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Fen1P39749 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Fen1P39749 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.11■□□□□ 0.65
Fen1P39749 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.11■□□□□ 0.65
Fen1P39749 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.11■□□□□ 0.65
Fen1P39749 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Fen1P39749 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.11■□□□□ 0.65
Fen1P39749 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fen1P39749 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fen1P39749 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.11■□□□□ 0.65
Fen1P39749 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fen1P39749 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fen1P39749 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Fen1P39749 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Fen1P39749 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fen1P39749 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fen1P39749 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fen1P39749 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fen1P39749 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fen1P39749 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms