Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.69■□□□□ 0.42
Foxa1P35582 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.69■□□□□ 0.42
Foxa1P35582 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxa1P35582 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxa1P35582 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.69■□□□□ 0.42
Foxa1P35582 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxa1P35582 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxa1P35582 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Foxa1P35582 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxa1P35582 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Foxa1P35582 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.68■□□□□ 0.42
Foxa1P35582 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.68■□□□□ 0.42
Foxa1P35582 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.68■□□□□ 0.42
Foxa1P35582 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Foxa1P35582 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxa1P35582 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Foxa1P35582 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Foxa1P35582 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Foxa1P35582 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Foxa1P35582 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Gm9988-201ENSMUST00000069786 435 ntBASIC17.67■□□□□ 0.42
Foxa1P35582 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.67■□□□□ 0.42
Foxa1P35582 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxa1P35582 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Foxa1P35582 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Foxa1P35582 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.66■□□□□ 0.42
Foxa1P35582 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.66■□□□□ 0.42
Foxa1P35582 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Foxa1P35582 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Foxa1P35582 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.66■□□□□ 0.42
Foxa1P35582 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxa1P35582 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.66■□□□□ 0.42
Foxa1P35582 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Foxa1P35582 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.66■□□□□ 0.42
Foxa1P35582 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Foxa1P35582 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Foxa1P35582 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Foxa1P35582 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Foxa1P35582 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxa1P35582 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxa1P35582 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxa1P35582 Gm7860-201ENSMUST00000121190 879 ntBASIC17.64■□□□□ 0.41
Foxa1P35582 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.64■□□□□ 0.41
Foxa1P35582 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxa1P35582 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Foxa1P35582 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.64■□□□□ 0.41
Foxa1P35582 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxa1P35582 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Foxa1P35582 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Foxa1P35582 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Foxa1P35582 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Foxa1P35582 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.64■□□□□ 0.41
Foxa1P35582 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Foxa1P35582 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxa1P35582 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxa1P35582 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxa1P35582 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxa1P35582 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxa1P35582 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxa1P35582 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxa1P35582 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.63■□□□□ 0.41
Foxa1P35582 Gm10493-201ENSMUST00000097270 612 ntBASIC17.63■□□□□ 0.41
Foxa1P35582 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxa1P35582 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.63■□□□□ 0.41
Foxa1P35582 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxa1P35582 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Foxa1P35582 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxa1P35582 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxa1P35582 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Foxa1P35582 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxa1P35582 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms