Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp13P33435 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp13P33435 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp13P33435 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Mmp13P33435 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Mmp13P33435 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mmp13P33435 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Mmp13P33435 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mmp13P33435 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mmp13P33435 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.51■□□□□ 0.71
Mmp13P33435 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.51■□□□□ 0.71
Mmp13P33435 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.51■□□□□ 0.71
Mmp13P33435 Gm8493-201ENSMUST00000196881 489 ntBASIC19.51■□□□□ 0.71
Mmp13P33435 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp13P33435 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.5■□□□□ 0.71
Mmp13P33435 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp13P33435 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp13P33435 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Mmp13P33435 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.5■□□□□ 0.71
Mmp13P33435 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp13P33435 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.5■□□□□ 0.71
Mmp13P33435 Gm6139-201ENSMUST00000079261 882 ntBASIC19.5■□□□□ 0.71
Mmp13P33435 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp13P33435 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Mmp13P33435 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp13P33435 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp13P33435 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.49■□□□□ 0.71
Mmp13P33435 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp13P33435 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp13P33435 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Mmp13P33435 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Mmp13P33435 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.49■□□□□ 0.71
Mmp13P33435 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp13P33435 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.49■□□□□ 0.71
Mmp13P33435 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Mmp13P33435 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp13P33435 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp13P33435 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Mmp13P33435 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp13P33435 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp13P33435 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp13P33435 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp13P33435 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Mmp13P33435 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Mmp13P33435 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp13P33435 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp13P33435 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp13P33435 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp13P33435 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Mmp13P33435 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.47■□□□□ 0.71
Mmp13P33435 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.47■□□□□ 0.71
Mmp13P33435 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.47■□□□□ 0.71
Mmp13P33435 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp13P33435 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp13P33435 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.46■□□□□ 0.71
Mmp13P33435 BC021767-201ENSMUST00000126387 1716 ntBASIC19.46■□□□□ 0.71
Mmp13P33435 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp13P33435 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp13P33435 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Mmp13P33435 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp13P33435 Serp2-204ENSMUST00000228055 705 ntBASIC19.46■□□□□ 0.71
Mmp13P33435 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.46■□□□□ 0.71
Mmp13P33435 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Mmp13P33435 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.46■□□□□ 0.71
Mmp13P33435 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp13P33435 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp13P33435 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp13P33435 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp13P33435 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp13P33435 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp13P33435 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Mmp13P33435 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Mmp13P33435 Gm43017-201ENSMUST00000198296 752 ntBASIC19.45■□□□□ 0.7
Mmp13P33435 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp13P33435 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.45■□□□□ 0.7
Mmp13P33435 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms