Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc6a1P31648 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc6a1P31648 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc6a1P31648 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.41■□□□□ 0.22
Slc6a1P31648 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a1P31648 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.4■□□□□ 0.22
Slc6a1P31648 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Slc6a1P31648 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.4■□□□□ 0.22
Slc6a1P31648 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.4■□□□□ 0.22
Slc6a1P31648 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.4■□□□□ 0.22
Slc6a1P31648 Gm40881-201ENSMUST00000223397 166 ntBASIC16.4■□□□□ 0.22
Slc6a1P31648 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a1P31648 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Slc6a1P31648 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Slc6a1P31648 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a1P31648 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.39■□□□□ 0.21
Slc6a1P31648 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.39■□□□□ 0.21
Slc6a1P31648 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.39■□□□□ 0.21
Slc6a1P31648 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a1P31648 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Slc6a1P31648 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Slc6a1P31648 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Slc6a1P31648 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Slc6a1P31648 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a1P31648 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.38■□□□□ 0.21
Slc6a1P31648 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Slc6a1P31648 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.37■□□□□ 0.21
Slc6a1P31648 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Slc6a1P31648 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.37■□□□□ 0.21
Slc6a1P31648 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.37■□□□□ 0.21
Slc6a1P31648 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Slc6a1P31648 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a1P31648 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.36■□□□□ 0.21
Slc6a1P31648 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a1P31648 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Slc6a1P31648 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.36■□□□□ 0.21
Slc6a1P31648 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a1P31648 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Slc6a1P31648 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Slc6a1P31648 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.36■□□□□ 0.21
Slc6a1P31648 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a1P31648 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a1P31648 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.36■□□□□ 0.21
Slc6a1P31648 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a1P31648 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.36■□□□□ 0.21
Slc6a1P31648 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms