Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Nedd8P29595 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nedd8P29595 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nedd8P29595 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Gm11687-201ENSMUST00000118911 886 ntBASIC17.73■□□□□ 0.43
Nedd8P29595 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.73■□□□□ 0.43
Nedd8P29595 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.73■□□□□ 0.43
Nedd8P29595 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.73■□□□□ 0.43
Nedd8P29595 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nedd8P29595 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.72■□□□□ 0.43
Nedd8P29595 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nedd8P29595 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nedd8P29595 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nedd8P29595 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nedd8P29595 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nedd8P29595 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.7■□□□□ 0.42
Nedd8P29595 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.7■□□□□ 0.42
Nedd8P29595 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.7■□□□□ 0.42
Nedd8P29595 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nedd8P29595 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Nedd8P29595 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nedd8P29595 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nedd8P29595 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Nedd8P29595 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nedd8P29595 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nedd8P29595 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nedd8P29595 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nedd8P29595 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nedd8P29595 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nedd8P29595 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nedd8P29595 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.67■□□□□ 0.42
Nedd8P29595 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nedd8P29595 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.67■□□□□ 0.42
Nedd8P29595 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.67■□□□□ 0.42
Nedd8P29595 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms