Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp3P28862 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp3P28862 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp3P28862 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp3P28862 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Mmp3P28862 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp3P28862 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp3P28862 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp3P28862 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp3P28862 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp3P28862 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
Mmp3P28862 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Mmp3P28862 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Mmp3P28862 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Mmp3P28862 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp3P28862 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp3P28862 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp3P28862 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp3P28862 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp3P28862 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp3P28862 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp3P28862 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp3P28862 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp3P28862 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Mmp3P28862 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.56■□□□□ 0.88
Mmp3P28862 Gm5408-201ENSMUST00000197998 747 ntBASIC20.56■□□□□ 0.88
Mmp3P28862 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp3P28862 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp3P28862 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.56■□□□□ 0.88
Mmp3P28862 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp3P28862 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp3P28862 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp3P28862 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Mmp3P28862 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Mmp3P28862 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp3P28862 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Mmp3P28862 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp3P28862 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Mmp3P28862 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp3P28862 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp3P28862 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp3P28862 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp3P28862 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp3P28862 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp3P28862 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.53■□□□□ 0.88
Mmp3P28862 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp3P28862 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Mmp3P28862 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp3P28862 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp3P28862 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp3P28862 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mmp3P28862 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mmp3P28862 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp3P28862 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Mmp3P28862 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp3P28862 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp3P28862 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp3P28862 Gm10653-202ENSMUST00000139570 835 ntBASIC20.52■□□□□ 0.88
Mmp3P28862 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp3P28862 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Mmp3P28862 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.52■□□□□ 0.88
Mmp3P28862 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp3P28862 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Mmp3P28862 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.52■□□□□ 0.87
Mmp3P28862 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
Mmp3P28862 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp3P28862 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.51■□□□□ 0.87
Mmp3P28862 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp3P28862 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Mmp3P28862 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp3P28862 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Mmp3P28862 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp3P28862 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.51■□□□□ 0.87
Mmp3P28862 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Mmp3P28862 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.51■□□□□ 0.87
Mmp3P28862 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp3P28862 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp3P28862 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp3P28862 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp3P28862 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp3P28862 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Mmp3P28862 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp3P28862 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Mmp3P28862 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Mmp3P28862 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms