Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col8a2P25318 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col8a2P25318 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col8a2P25318 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.02■□□□□ 0.16
Col8a2P25318 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Col8a2P25318 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col8a2P25318 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col8a2P25318 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col8a2P25318 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col8a2P25318 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.01■□□□□ 0.15
Col8a2P25318 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col8a2P25318 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col8a2P25318 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Col8a2P25318 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.01■□□□□ 0.15
Col8a2P25318 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
Col8a2P25318 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col8a2P25318 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col8a2P25318 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col8a2P25318 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.01■□□□□ 0.15
Col8a2P25318 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.01■□□□□ 0.15
Col8a2P25318 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.01■□□□□ 0.15
Col8a2P25318 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.01■□□□□ 0.15
Col8a2P25318 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col8a2P25318 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col8a2P25318 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col8a2P25318 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Col8a2P25318 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16■□□□□ 0.15
Col8a2P25318 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col8a2P25318 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16■□□□□ 0.15
Col8a2P25318 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16■□□□□ 0.15
Col8a2P25318 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16■□□□□ 0.15
Col8a2P25318 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Col8a2P25318 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col8a2P25318 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col8a2P25318 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col8a2P25318 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Col8a2P25318 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col8a2P25318 Gm7514-201ENSMUST00000209475 934 ntBASIC15.99■□□□□ 0.15
Col8a2P25318 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col8a2P25318 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.99■□□□□ 0.15
Col8a2P25318 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col8a2P25318 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col8a2P25318 Gm7860-201ENSMUST00000121190 879 ntBASIC15.98■□□□□ 0.15
Col8a2P25318 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col8a2P25318 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.98■□□□□ 0.15
Col8a2P25318 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Col8a2P25318 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col8a2P25318 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col8a2P25318 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Col8a2P25318 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.97■□□□□ 0.15
Col8a2P25318 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.97■□□□□ 0.15
Col8a2P25318 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.97■□□□□ 0.15
Col8a2P25318 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col8a2P25318 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col8a2P25318 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.97■□□□□ 0.15
Col8a2P25318 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col8a2P25318 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col8a2P25318 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col8a2P25318 Gm13146-201ENSMUST00000118508 780 ntBASIC15.96■□□□□ 0.15
Col8a2P25318 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col8a2P25318 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.96■□□□□ 0.15
Col8a2P25318 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.96■□□□□ 0.15
Col8a2P25318 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col8a2P25318 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col8a2P25318 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col8a2P25318 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col8a2P25318 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col8a2P25318 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col8a2P25318 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.96■□□□□ 0.14
Col8a2P25318 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.95■□□□□ 0.14
Col8a2P25318 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col8a2P25318 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col8a2P25318 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.95■□□□□ 0.14
Col8a2P25318 Nespas-201ENSMUST00000143738 1083 ntBASIC15.95■□□□□ 0.14
Col8a2P25318 Gm6420-201ENSMUST00000193885 723 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms