Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BdnfP21237 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BdnfP21237 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BdnfP21237 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
BdnfP21237 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BdnfP21237 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BdnfP21237 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
BdnfP21237 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BdnfP21237 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BdnfP21237 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.26■□□□□ 0.51
BdnfP21237 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BdnfP21237 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.26■□□□□ 0.51
BdnfP21237 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BdnfP21237 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BdnfP21237 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BdnfP21237 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BdnfP21237 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
BdnfP21237 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.25■□□□□ 0.51
BdnfP21237 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.25■□□□□ 0.51
BdnfP21237 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.25■□□□□ 0.51
BdnfP21237 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BdnfP21237 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BdnfP21237 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BdnfP21237 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.24■□□□□ 0.51
BdnfP21237 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BdnfP21237 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.24■□□□□ 0.51
BdnfP21237 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
BdnfP21237 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.24■□□□□ 0.51
BdnfP21237 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BdnfP21237 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BdnfP21237 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BdnfP21237 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BdnfP21237 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.23■□□□□ 0.51
BdnfP21237 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BdnfP21237 Rarb-207ENSMUST00000225921 2756 ntBASIC18.23■□□□□ 0.51
BdnfP21237 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BdnfP21237 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.23■□□□□ 0.51
BdnfP21237 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BdnfP21237 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BdnfP21237 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
BdnfP21237 Gm12922-201ENSMUST00000120626 809 ntBASIC18.23■□□□□ 0.51
BdnfP21237 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BdnfP21237 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BdnfP21237 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.23■□□□□ 0.51
BdnfP21237 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BdnfP21237 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BdnfP21237 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.23■□□□□ 0.51
BdnfP21237 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.22■□□□□ 0.51
BdnfP21237 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
BdnfP21237 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BdnfP21237 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BdnfP21237 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BdnfP21237 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BdnfP21237 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.21■□□□□ 0.51
BdnfP21237 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.21■□□□□ 0.51
BdnfP21237 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BdnfP21237 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.21■□□□□ 0.51
BdnfP21237 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BdnfP21237 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BdnfP21237 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BdnfP21237 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
BdnfP21237 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.21■□□□□ 0.5
BdnfP21237 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BdnfP21237 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BdnfP21237 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
BdnfP21237 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BdnfP21237 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BdnfP21237 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
BdnfP21237 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.2■□□□□ 0.5
BdnfP21237 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.2■□□□□ 0.5
BdnfP21237 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BdnfP21237 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
BdnfP21237 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BdnfP21237 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BdnfP21237 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
BdnfP21237 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BdnfP21237 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
BdnfP21237 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BdnfP21237 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.2■□□□□ 0.5
BdnfP21237 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BdnfP21237 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms