Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf1P15314 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf1P15314 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf1P15314 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf1P15314 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Irf1P15314 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Irf1P15314 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf1P15314 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf1P15314 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf1P15314 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.58■□□□□ 0.4
Irf1P15314 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Irf1P15314 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 Gm42642-201ENSMUST00000200683 355 ntBASIC17.57■□□□□ 0.4
Irf1P15314 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Irf1P15314 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Irf1P15314 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Irf1P15314 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf1P15314 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.56■□□□□ 0.4
Irf1P15314 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf1P15314 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Irf1P15314 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.56■□□□□ 0.4
Irf1P15314 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Irf1P15314 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Irf1P15314 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf1P15314 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Irf1P15314 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf1P15314 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf1P15314 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf1P15314 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Irf1P15314 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Irf1P15314 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Irf1P15314 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Irf1P15314 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf1P15314 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.56■□□□□ 0.4
Irf1P15314 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf1P15314 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Irf1P15314 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.55■□□□□ 0.4
Irf1P15314 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf1P15314 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.55■□□□□ 0.4
Irf1P15314 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Irf1P15314 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Irf1P15314 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.55■□□□□ 0.4
Irf1P15314 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf1P15314 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.55■□□□□ 0.4
Irf1P15314 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Irf1P15314 Gm42569-201ENSMUST00000200539 472 ntBASIC17.55■□□□□ 0.4
Irf1P15314 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf1P15314 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf1P15314 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf1P15314 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf1P15314 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Irf1P15314 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.54■□□□□ 0.4
Irf1P15314 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.54■□□□□ 0.4
Irf1P15314 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.54■□□□□ 0.4
Irf1P15314 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
Irf1P15314 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Irf1P15314 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Irf1P15314 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Irf1P15314 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Irf1P15314 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf1P15314 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf1P15314 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Irf1P15314 Gm18671-201ENSMUST00000214826 683 ntBASIC17.53■□□□□ 0.4
Irf1P15314 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf1P15314 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf1P15314 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf1P15314 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Irf1P15314 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Irf1P15314 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf1P15314 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf1P15314 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf1P15314 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.52■□□□□ 0.4
Irf1P15314 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Irf1P15314 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Irf1P15314 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Irf1P15314 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Irf1P15314 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Irf1P15314 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.52■□□□□ 0.4
Irf1P15314 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Irf1P15314 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Irf1P15314 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Irf1P15314 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms