Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cntn1P12960 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cntn1P12960 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.35■□□□□ 0.53
Cntn1P12960 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cntn1P12960 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.35■□□□□ 0.53
Cntn1P12960 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cntn1P12960 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cntn1P12960 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Cntn1P12960 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Cntn1P12960 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cntn1P12960 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
Cntn1P12960 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Gm7514-201ENSMUST00000209475 934 ntBASIC18.34■□□□□ 0.53
Cntn1P12960 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.34■□□□□ 0.53
Cntn1P12960 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cntn1P12960 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntn1P12960 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cntn1P12960 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cntn1P12960 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.33■□□□□ 0.52
Cntn1P12960 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cntn1P12960 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.33■□□□□ 0.52
Cntn1P12960 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cntn1P12960 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cntn1P12960 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cntn1P12960 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.32■□□□□ 0.52
Cntn1P12960 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntn1P12960 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cntn1P12960 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.32■□□□□ 0.52
Cntn1P12960 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.32■□□□□ 0.52
Cntn1P12960 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cntn1P12960 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntn1P12960 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.32■□□□□ 0.52
Cntn1P12960 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cntn1P12960 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntn1P12960 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntn1P12960 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntn1P12960 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.31■□□□□ 0.52
Cntn1P12960 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntn1P12960 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntn1P12960 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntn1P12960 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntn1P12960 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cntn1P12960 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntn1P12960 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntn1P12960 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Gm13146-201ENSMUST00000118508 780 ntBASIC18.3■□□□□ 0.52
Cntn1P12960 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.3■□□□□ 0.52
Cntn1P12960 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.3■□□□□ 0.52
Cntn1P12960 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.3■□□□□ 0.52
Cntn1P12960 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cntn1P12960 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntn1P12960 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cntn1P12960 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cntn1P12960 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cntn1P12960 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cntn1P12960 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cntn1P12960 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cntn1P12960 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cntn1P12960 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cntn1P12960 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cntn1P12960 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cntn1P12960 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cntn1P12960 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cntn1P12960 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.28■□□□□ 0.52
Cntn1P12960 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cntn1P12960 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cntn1P12960 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cntn1P12960 Gm7860-201ENSMUST00000121190 879 ntBASIC18.28■□□□□ 0.52
Cntn1P12960 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cntn1P12960 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cntn1P12960 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cntn1P12960 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.28■□□□□ 0.52
Cntn1P12960 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cntn1P12960 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.27■□□□□ 0.52
Cntn1P12960 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cntn1P12960 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cntn1P12960 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.27■□□□□ 0.52
Cntn1P12960 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cntn1P12960 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cntn1P12960 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cntn1P12960 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cntn1P12960 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cntn1P12960 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cntn1P12960 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms