Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fn1P11276 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fn1P11276 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fn1P11276 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fn1P11276 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fn1P11276 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Fn1P11276 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Fn1P11276 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fn1P11276 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fn1P11276 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.89□□□□□ -0.03
Fn1P11276 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Fn1P11276 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fn1P11276 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Fn1P11276 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fn1P11276 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Fn1P11276 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.88□□□□□ -0.03
Fn1P11276 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fn1P11276 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fn1P11276 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.88□□□□□ -0.03
Fn1P11276 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.88□□□□□ -0.03
Fn1P11276 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fn1P11276 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fn1P11276 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fn1P11276 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fn1P11276 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fn1P11276 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fn1P11276 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fn1P11276 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.88□□□□□ -0.03
Fn1P11276 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fn1P11276 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fn1P11276 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fn1P11276 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.87□□□□□ -0.03
Fn1P11276 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fn1P11276 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fn1P11276 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fn1P11276 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fn1P11276 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fn1P11276 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.86□□□□□ -0.03
Fn1P11276 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Fn1P11276 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Fn1P11276 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Fn1P11276 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.86□□□□□ -0.03
Fn1P11276 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fn1P11276 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 AA414768-201ENSMUST00000121924 1257 ntBASIC14.85□□□□□ -0.03
Fn1P11276 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.85□□□□□ -0.03
Fn1P11276 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.85□□□□□ -0.03
Fn1P11276 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.85□□□□□ -0.03
Fn1P11276 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.85□□□□□ -0.03
Fn1P11276 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.85□□□□□ -0.03
Fn1P11276 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.85□□□□□ -0.03
Fn1P11276 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Fn1P11276 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fn1P11276 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Fn1P11276 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fn1P11276 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fn1P11276 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Fn1P11276 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fn1P11276 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.84□□□□□ -0.03
Fn1P11276 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fn1P11276 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fn1P11276 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fn1P11276 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fn1P11276 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fn1P11276 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.84□□□□□ -0.03
Fn1P11276 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fn1P11276 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC14.83□□□□□ -0.04
Fn1P11276 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fn1P11276 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fn1P11276 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fn1P11276 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fn1P11276 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fn1P11276 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fn1P11276 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fn1P11276 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.83□□□□□ -0.04
Fn1P11276 Gm7860-201ENSMUST00000121190 879 ntBASIC14.83□□□□□ -0.04
Fn1P11276 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.83□□□□□ -0.04
Fn1P11276 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fn1P11276 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fn1P11276 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Fn1P11276 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms