Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl3P10855 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ccl3P10855 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccl3P10855 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccl3P10855 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccl3P10855 Mir7071-201ENSMUST00000184847 69 ntBASIC17■□□□□ 0.31
Ccl3P10855 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17■□□□□ 0.31
Ccl3P10855 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccl3P10855 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccl3P10855 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccl3P10855 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccl3P10855 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl3P10855 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl3P10855 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccl3P10855 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccl3P10855 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.99■□□□□ 0.31
Ccl3P10855 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ccl3P10855 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl3P10855 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl3P10855 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl3P10855 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl3P10855 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl3P10855 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ccl3P10855 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ccl3P10855 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccl3P10855 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.98■□□□□ 0.31
Ccl3P10855 Gm12896-201ENSMUST00000118430 226 ntBASIC16.98■□□□□ 0.31
Ccl3P10855 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.98■□□□□ 0.31
Ccl3P10855 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccl3P10855 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ccl3P10855 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ccl3P10855 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Ccl3P10855 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl3P10855 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl3P10855 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl3P10855 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl3P10855 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccl3P10855 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccl3P10855 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl3P10855 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl3P10855 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccl3P10855 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.31
Ccl3P10855 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccl3P10855 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.96■□□□□ 0.31
Ccl3P10855 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccl3P10855 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ccl3P10855 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccl3P10855 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccl3P10855 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccl3P10855 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ccl3P10855 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccl3P10855 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccl3P10855 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccl3P10855 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccl3P10855 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccl3P10855 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccl3P10855 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccl3P10855 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl3P10855 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl3P10855 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccl3P10855 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl3P10855 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl3P10855 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ccl3P10855 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccl3P10855 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ccl3P10855 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl3P10855 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.94■□□□□ 0.3
Ccl3P10855 Mir6982-201ENSMUST00000184354 68 ntBASIC16.94■□□□□ 0.3
Ccl3P10855 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl3P10855 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl3P10855 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl3P10855 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.94■□□□□ 0.3
Ccl3P10855 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl3P10855 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl3P10855 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccl3P10855 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccl3P10855 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl3P10855 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccl3P10855 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl3P10855 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl3P10855 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl3P10855 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl3P10855 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl3P10855 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccl3P10855 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl3P10855 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccl3P10855 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccl3P10855 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Ccl3P10855 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms