Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm27405-201ENSMUST00000184201 112 ntBASIC17.05■□□□□ 0.32
P06344 Gm7291-201ENSMUST00000199147 382 ntBASIC17.05■□□□□ 0.32
P06344 AV356131-201ENSMUST00000206201 750 ntBASIC17.05■□□□□ 0.32
P06344 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06344 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
P06344 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.05■□□□□ 0.32
P06344 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06344 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
P06344 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.05■□□□□ 0.32
P06344 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
P06344 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P06344 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P06344 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P06344 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
P06344 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P06344 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
P06344 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P06344 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P06344 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P06344 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P06344 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P06344 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P06344 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P06344 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
P06344 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
P06344 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
P06344 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P06344 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P06344 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P06344 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P06344 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.03■□□□□ 0.32
P06344 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
P06344 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P06344 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.02■□□□□ 0.32
P06344 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.02■□□□□ 0.32
P06344 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P06344 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
P06344 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
P06344 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
P06344 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P06344 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
P06344 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
P06344 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
P06344 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.01■□□□□ 0.31
P06344 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.01■□□□□ 0.31
P06344 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.01■□□□□ 0.31
P06344 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06344 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
P06344 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
P06344 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17■□□□□ 0.31
P06344 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P06344 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
P06344 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17■□□□□ 0.31
P06344 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17■□□□□ 0.31
P06344 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17■□□□□ 0.31
P06344 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P06344 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P06344 Gm20100-201ENSMUST00000209418 2272 ntBASIC17■□□□□ 0.31
P06344 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
P06344 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
P06344 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P06344 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P06344 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.99■□□□□ 0.31
P06344 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P06344 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
P06344 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.99■□□□□ 0.31
P06344 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
P06344 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P06344 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.99■□□□□ 0.31
P06344 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.99■□□□□ 0.31
P06344 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
P06344 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.99■□□□□ 0.31
P06344 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.99■□□□□ 0.31
P06344 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P06344 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P06344 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
P06344 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P06344 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P06344 Gm38205-201ENSMUST00000192243 258 ntBASIC16.98■□□□□ 0.31
P06344 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P06344 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P06344 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P06344 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P06344 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms