Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06336 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P06336 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06336 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P06336 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P06336 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P06336 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P06336 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P06336 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
P06336 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P06336 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
P06336 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
P06336 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P06336 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P06336 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06336 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06336 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06336 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06336 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
P06336 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
P06336 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
P06336 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
P06336 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.61■□□□□ 0.41
P06336 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06336 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.61■□□□□ 0.41
P06336 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P06336 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.61■□□□□ 0.41
P06336 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.61■□□□□ 0.41
P06336 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P06336 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.61■□□□□ 0.41
P06336 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.61■□□□□ 0.41
P06336 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.61■□□□□ 0.41
P06336 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.61■□□□□ 0.41
P06336 Gm5874-201ENSMUST00000096101 508 ntBASIC17.61■□□□□ 0.41
P06336 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P06336 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06336 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P06336 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P06336 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06336 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P06336 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
P06336 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.6■□□□□ 0.41
P06336 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P06336 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P06336 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P06336 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.6■□□□□ 0.41
P06336 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P06336 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P06336 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
P06336 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P06336 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
P06336 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P06336 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P06336 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
P06336 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
P06336 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.59■□□□□ 0.41
P06336 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Gm7860-201ENSMUST00000121190 879 ntBASIC17.59■□□□□ 0.41
P06336 Gm18284-201ENSMUST00000172604 624 ntBASIC17.59■□□□□ 0.41
P06336 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
P06336 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P06336 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P06336 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.58■□□□□ 0.41
P06336 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
P06336 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
P06336 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P06336 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.58■□□□□ 0.4
P06336 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
P06336 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P06336 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P06336 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
P06336 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
P06336 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
P06336 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
P06336 Reep4-203ENSMUST00000226563 1444 ntBASIC17.57■□□□□ 0.4
P06336 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Gm42778-201ENSMUST00000199644 553 ntBASIC17.57■□□□□ 0.4
P06336 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
P06336 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
P06336 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms