Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.31■□□□□ 0.68
PdgfrbP05622 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.31■□□□□ 0.68
PdgfrbP05622 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.31■□□□□ 0.68
PdgfrbP05622 Gm43060-201ENSMUST00000200621 289 ntBASIC19.31■□□□□ 0.68
PdgfrbP05622 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PdgfrbP05622 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PdgfrbP05622 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PdgfrbP05622 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PdgfrbP05622 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdgfrbP05622 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdgfrbP05622 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdgfrbP05622 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PdgfrbP05622 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.3■□□□□ 0.68
PdgfrbP05622 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdgfrbP05622 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdgfrbP05622 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdgfrbP05622 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdgfrbP05622 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PdgfrbP05622 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PdgfrbP05622 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PdgfrbP05622 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdgfrbP05622 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PdgfrbP05622 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.29■□□□□ 0.68
PdgfrbP05622 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PdgfrbP05622 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.29■□□□□ 0.68
PdgfrbP05622 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PdgfrbP05622 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PdgfrbP05622 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PdgfrbP05622 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PdgfrbP05622 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdgfrbP05622 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.28■□□□□ 0.68
PdgfrbP05622 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdgfrbP05622 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PdgfrbP05622 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdgfrbP05622 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.28■□□□□ 0.68
PdgfrbP05622 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdgfrbP05622 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdgfrbP05622 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PdgfrbP05622 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdgfrbP05622 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdgfrbP05622 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdgfrbP05622 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdgfrbP05622 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PdgfrbP05622 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PdgfrbP05622 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfrbP05622 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfrbP05622 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfrbP05622 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.27■□□□□ 0.68
PdgfrbP05622 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfrbP05622 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfrbP05622 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfrbP05622 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfrbP05622 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PdgfrbP05622 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.27■□□□□ 0.67
PdgfrbP05622 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PdgfrbP05622 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfrbP05622 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfrbP05622 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.26■□□□□ 0.67
PdgfrbP05622 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfrbP05622 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfrbP05622 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfrbP05622 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfrbP05622 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfrbP05622 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfrbP05622 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfrbP05622 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PdgfrbP05622 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PdgfrbP05622 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PdgfrbP05622 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PdgfrbP05622 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfrbP05622 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfrbP05622 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfrbP05622 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfrbP05622 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
PdgfrbP05622 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfrbP05622 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.24■□□□□ 0.67
PdgfrbP05622 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PdgfrbP05622 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfrbP05622 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PdgfrbP05622 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.24■□□□□ 0.67
PdgfrbP05622 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PdgfrbP05622 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PdgfrbP05622 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PdgfrbP05622 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrbP05622 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PdgfrbP05622 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrbP05622 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PdgfrbP05622 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrbP05622 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PdgfrbP05622 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrbP05622 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrbP05622 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.23■□□□□ 0.67
PdgfrbP05622 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.23■□□□□ 0.67
PdgfrbP05622 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrbP05622 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrbP05622 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrbP05622 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrbP05622 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms