Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PrnpP04925 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PrnpP04925 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PrnpP04925 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.96■□□□□ 0.79
PrnpP04925 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PrnpP04925 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PrnpP04925 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PrnpP04925 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PrnpP04925 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PrnpP04925 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PrnpP04925 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PrnpP04925 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PrnpP04925 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.95■□□□□ 0.78
PrnpP04925 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PrnpP04925 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.95■□□□□ 0.78
PrnpP04925 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PrnpP04925 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.94■□□□□ 0.78
PrnpP04925 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.94■□□□□ 0.78
PrnpP04925 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PrnpP04925 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PrnpP04925 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PrnpP04925 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PrnpP04925 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PrnpP04925 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PrnpP04925 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PrnpP04925 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PrnpP04925 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PrnpP04925 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PrnpP04925 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.93■□□□□ 0.78
PrnpP04925 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PrnpP04925 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.93■□□□□ 0.78
PrnpP04925 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PrnpP04925 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PrnpP04925 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.93■□□□□ 0.78
PrnpP04925 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.93■□□□□ 0.78
PrnpP04925 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PrnpP04925 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PrnpP04925 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PrnpP04925 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PrnpP04925 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PrnpP04925 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PrnpP04925 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PrnpP04925 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
PrnpP04925 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PrnpP04925 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PrnpP04925 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PrnpP04925 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PrnpP04925 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PrnpP04925 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PrnpP04925 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PrnpP04925 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.91■□□□□ 0.78
PrnpP04925 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PrnpP04925 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PrnpP04925 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.9■□□□□ 0.78
PrnpP04925 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PrnpP04925 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.9■□□□□ 0.78
PrnpP04925 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PrnpP04925 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.89■□□□□ 0.77
PrnpP04925 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PrnpP04925 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PrnpP04925 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PrnpP04925 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PrnpP04925 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PrnpP04925 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.88■□□□□ 0.77
PrnpP04925 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PrnpP04925 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.88■□□□□ 0.77
PrnpP04925 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PrnpP04925 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PrnpP04925 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PrnpP04925 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PrnpP04925 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PrnpP04925 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PrnpP04925 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.87■□□□□ 0.77
PrnpP04925 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
PrnpP04925 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PrnpP04925 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.87■□□□□ 0.77
PrnpP04925 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PrnpP04925 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PrnpP04925 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PrnpP04925 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PrnpP04925 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PrnpP04925 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PrnpP04925 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PrnpP04925 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PrnpP04925 Gm12896-201ENSMUST00000118430 226 ntBASIC19.86■□□□□ 0.77
PrnpP04925 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PrnpP04925 Gm27275-201ENSMUST00000184318 272 ntBASIC19.86■□□□□ 0.77
PrnpP04925 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PrnpP04925 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PrnpP04925 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PrnpP04925 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms