Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Col4a1P02463 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col4a1P02463 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col4a1P02463 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col4a1P02463 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Col4a1P02463 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Col4a1P02463 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col4a1P02463 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC23.87■■□□□ 1.41
Col4a1P02463 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col4a1P02463 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col4a1P02463 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col4a1P02463 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Col4a1P02463 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col4a1P02463 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Col4a1P02463 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col4a1P02463 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col4a1P02463 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.86■■□□□ 1.41
Col4a1P02463 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col4a1P02463 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Col4a1P02463 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col4a1P02463 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Col4a1P02463 Gm37352-201ENSMUST00000193908 2181 ntBASIC23.85■■□□□ 1.41
Col4a1P02463 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Col4a1P02463 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.85■■□□□ 1.41
Col4a1P02463 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col4a1P02463 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Col4a1P02463 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col4a1P02463 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col4a1P02463 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.84■■□□□ 1.41
Col4a1P02463 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col4a1P02463 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col4a1P02463 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col4a1P02463 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col4a1P02463 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col4a1P02463 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Col4a1P02463 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Col4a1P02463 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col4a1P02463 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col4a1P02463 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col4a1P02463 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col4a1P02463 Gm13181-201ENSMUST00000120117 1069 ntBASIC23.83■■□□□ 1.4
Col4a1P02463 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col4a1P02463 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col4a1P02463 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col4a1P02463 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col4a1P02463 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col4a1P02463 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Col4a1P02463 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col4a1P02463 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Col4a1P02463 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Col4a1P02463 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Col4a1P02463 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Col4a1P02463 Gm12896-201ENSMUST00000118430 226 ntBASIC23.81■■□□□ 1.4
Col4a1P02463 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC23.81■■□□□ 1.4
Col4a1P02463 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col4a1P02463 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col4a1P02463 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col4a1P02463 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Col4a1P02463 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col4a1P02463 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col4a1P02463 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col4a1P02463 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.8■■□□□ 1.4
Col4a1P02463 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col4a1P02463 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col4a1P02463 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col4a1P02463 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Col4a1P02463 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col4a1P02463 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.79■■□□□ 1.4
Col4a1P02463 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Col4a1P02463 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.79■■□□□ 1.4
Col4a1P02463 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Col4a1P02463 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.79■■□□□ 1.4
Col4a1P02463 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col4a1P02463 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col4a1P02463 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Col4a1P02463 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.78■■□□□ 1.4
Col4a1P02463 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.78■■□□□ 1.4
Col4a1P02463 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.78■■□□□ 1.4
Col4a1P02463 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col4a1P02463 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col4a1P02463 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col4a1P02463 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col4a1P02463 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col4a1P02463 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col4a1P02463 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.77■■□□□ 1.4
Col4a1P02463 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Col4a1P02463 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col4a1P02463 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col4a1P02463 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col4a1P02463 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms