Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01852 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
P01852 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01852 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P01852 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.44■□□□□ 0.38
P01852 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.44■□□□□ 0.38
P01852 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01852 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01852 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P01852 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01852 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.44■□□□□ 0.38
P01852 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
P01852 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01852 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01852 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.43■□□□□ 0.38
P01852 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01852 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01852 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
P01852 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01852 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01852 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.43■□□□□ 0.38
P01852 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01852 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01852 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.42■□□□□ 0.38
P01852 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
P01852 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P01852 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P01852 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.42■□□□□ 0.38
P01852 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.42■□□□□ 0.38
P01852 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01852 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01852 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
P01852 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01852 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01852 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01852 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
P01852 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.41■□□□□ 0.38
P01852 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01852 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01852 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
P01852 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.41■□□□□ 0.38
P01852 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01852 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01852 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P01852 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01852 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01852 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
P01852 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01852 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P01852 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01852 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01852 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
P01852 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P01852 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P01852 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
P01852 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P01852 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.39■□□□□ 0.37
P01852 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P01852 Gm9988-201ENSMUST00000069786 435 ntBASIC17.39■□□□□ 0.37
P01852 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P01852 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
P01852 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.38■□□□□ 0.37
P01852 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.38■□□□□ 0.37
P01852 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P01852 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
P01852 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
P01852 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.37■□□□□ 0.37
P01852 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.37■□□□□ 0.37
P01852 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
P01852 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
P01852 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P01852 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Gm42778-201ENSMUST00000199644 553 ntBASIC17.36■□□□□ 0.37
P01852 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
P01852 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms