Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Igh-VJ558P01758 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.58■□□□□ 0.25
Igh-VJ558P01758 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Igh-VJ558P01758 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Gm26833-201ENSMUST00000180899 440 ntBASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Gm43017-201ENSMUST00000198296 752 ntBASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igh-VJ558P01758 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igh-VJ558P01758 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Gm40848-201ENSMUST00000221998 324 ntBASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igh-VJ558P01758 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Gm7860-201ENSMUST00000121190 879 ntBASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igh-VJ558P01758 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Igh-VJ558P01758 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms