Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.47□□□□□ -0.25
Sh2d1aO88890 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh2d1aO88890 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh2d1aO88890 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh2d1aO88890 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh2d1aO88890 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh2d1aO88890 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh2d1aO88890 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Sh2d1aO88890 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh2d1aO88890 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Sh2d1aO88890 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh2d1aO88890 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2d1aO88890 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2d1aO88890 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2d1aO88890 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
Sh2d1aO88890 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.45□□□□□ -0.26
Sh2d1aO88890 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2d1aO88890 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.44□□□□□ -0.26
Sh2d1aO88890 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sh2d1aO88890 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2d1aO88890 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.43□□□□□ -0.26
Sh2d1aO88890 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sh2d1aO88890 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2d1aO88890 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.43□□□□□ -0.26
Sh2d1aO88890 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.43□□□□□ -0.26
Sh2d1aO88890 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2d1aO88890 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2d1aO88890 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2d1aO88890 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2d1aO88890 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2d1aO88890 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.42□□□□□ -0.26
Sh2d1aO88890 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.42□□□□□ -0.26
Sh2d1aO88890 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Sh2d1aO88890 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms