Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.62■□□□□ 0.41
Cops4O88544 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.62■□□□□ 0.41
Cops4O88544 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cops4O88544 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops4O88544 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops4O88544 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Cops4O88544 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops4O88544 Gm7417-201ENSMUST00000192950 473 ntBASIC17.61■□□□□ 0.41
Cops4O88544 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops4O88544 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Cops4O88544 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops4O88544 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops4O88544 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cops4O88544 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cops4O88544 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Cops4O88544 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.61■□□□□ 0.41
Cops4O88544 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Cops4O88544 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.6■□□□□ 0.41
Cops4O88544 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cops4O88544 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cops4O88544 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops4O88544 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.59■□□□□ 0.41
Cops4O88544 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cops4O88544 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cops4O88544 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cops4O88544 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.59■□□□□ 0.41
Cops4O88544 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops4O88544 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cops4O88544 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cops4O88544 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cops4O88544 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.58■□□□□ 0.41
Cops4O88544 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.58■□□□□ 0.4
Cops4O88544 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cops4O88544 Etf1-202ENSMUST00000180351 108 ntBASIC17.58■□□□□ 0.4
Cops4O88544 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops4O88544 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops4O88544 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cops4O88544 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.57■□□□□ 0.4
Cops4O88544 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cops4O88544 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops4O88544 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cops4O88544 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cops4O88544 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.56■□□□□ 0.4
Cops4O88544 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cops4O88544 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Cops4O88544 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cops4O88544 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cops4O88544 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops4O88544 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops4O88544 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.55■□□□□ 0.4
Cops4O88544 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Cops4O88544 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cops4O88544 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops4O88544 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cops4O88544 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops4O88544 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.55■□□□□ 0.4
Cops4O88544 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cops4O88544 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops4O88544 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms