Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1hO88427 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1hO88427 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1hO88427 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1hO88427 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1hO88427 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1hO88427 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.82■□□□□ 0.6
Cacna1hO88427 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cacna1hO88427 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1hO88427 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.82■□□□□ 0.6
Cacna1hO88427 Gm10013-201ENSMUST00000106074 672 ntBASIC18.82■□□□□ 0.6
Cacna1hO88427 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1hO88427 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.82■□□□□ 0.6
Cacna1hO88427 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1hO88427 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1hO88427 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cacna1hO88427 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1hO88427 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1hO88427 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.81■□□□□ 0.6
Cacna1hO88427 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1hO88427 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1hO88427 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.81■□□□□ 0.6
Cacna1hO88427 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1hO88427 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.8■□□□□ 0.6
Cacna1hO88427 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1hO88427 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cacna1hO88427 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1hO88427 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1hO88427 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1hO88427 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1hO88427 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Cacna1hO88427 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1hO88427 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacna1hO88427 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1hO88427 Gm33142-201ENSMUST00000193913 867 ntBASIC18.79■□□□□ 0.6
Cacna1hO88427 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Cacna1hO88427 Gm9103-201ENSMUST00000119371 405 ntBASIC18.78■□□□□ 0.6
Cacna1hO88427 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.78■□□□□ 0.6
Cacna1hO88427 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.78■□□□□ 0.6
Cacna1hO88427 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1hO88427 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cacna1hO88427 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.78■□□□□ 0.6
Cacna1hO88427 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cacna1hO88427 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1hO88427 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1hO88427 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.77■□□□□ 0.6
Cacna1hO88427 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1hO88427 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.77■□□□□ 0.6
Cacna1hO88427 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1hO88427 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cacna1hO88427 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.77■□□□□ 0.6
Cacna1hO88427 Odf3b-204ENSMUST00000227834 930 ntBASIC18.77■□□□□ 0.6
Cacna1hO88427 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.76■□□□□ 0.59
Cacna1hO88427 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1hO88427 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1hO88427 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1hO88427 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1hO88427 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cacna1hO88427 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1hO88427 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1hO88427 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1hO88427 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1hO88427 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1hO88427 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1hO88427 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1hO88427 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1hO88427 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1hO88427 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1hO88427 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1hO88427 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.73■□□□□ 0.59
Cacna1hO88427 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1hO88427 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1hO88427 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.73■□□□□ 0.59
Cacna1hO88427 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.73■□□□□ 0.59
Cacna1hO88427 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1hO88427 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1hO88427 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cacna1hO88427 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1hO88427 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1hO88427 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms