Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh16O88338 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh16O88338 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdh16O88338 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.69■□□□□ 0.58
Cdh16O88338 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdh16O88338 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.69■□□□□ 0.58
Cdh16O88338 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cdh16O88338 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.69■□□□□ 0.58
Cdh16O88338 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdh16O88338 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh16O88338 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cdh16O88338 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cdh16O88338 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.68■□□□□ 0.58
Cdh16O88338 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cdh16O88338 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh16O88338 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh16O88338 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh16O88338 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Cdh16O88338 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh16O88338 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.67■□□□□ 0.58
Cdh16O88338 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.67■□□□□ 0.58
Cdh16O88338 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cdh16O88338 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh16O88338 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh16O88338 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh16O88338 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh16O88338 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh16O88338 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh16O88338 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh16O88338 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cdh16O88338 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh16O88338 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cdh16O88338 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh16O88338 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh16O88338 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh16O88338 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.66■□□□□ 0.58
Cdh16O88338 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh16O88338 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh16O88338 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh16O88338 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.66■□□□□ 0.58
Cdh16O88338 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.66■□□□□ 0.58
Cdh16O88338 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh16O88338 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh16O88338 Gm5812-201ENSMUST00000061073 957 ntBASIC18.66■□□□□ 0.58
Cdh16O88338 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh16O88338 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh16O88338 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Cdh16O88338 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.66■□□□□ 0.58
Cdh16O88338 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.65■□□□□ 0.58
Cdh16O88338 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Cdh16O88338 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh16O88338 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Cdh16O88338 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh16O88338 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh16O88338 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.64■□□□□ 0.57
Cdh16O88338 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh16O88338 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.64■□□□□ 0.57
Cdh16O88338 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.64■□□□□ 0.57
Cdh16O88338 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cdh16O88338 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh16O88338 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh16O88338 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms