Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc3O88196 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc3O88196 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Ttc3O88196 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc3O88196 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.2■□□□□ 0.82
Ttc3O88196 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc3O88196 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc3O88196 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc3O88196 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.19■□□□□ 0.82
Ttc3O88196 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc3O88196 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc3O88196 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ttc3O88196 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ttc3O88196 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc3O88196 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ttc3O88196 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.19■□□□□ 0.82
Ttc3O88196 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.19■□□□□ 0.82
Ttc3O88196 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.19■□□□□ 0.82
Ttc3O88196 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ttc3O88196 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc3O88196 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc3O88196 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc3O88196 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc3O88196 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ttc3O88196 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.17■□□□□ 0.82
Ttc3O88196 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ttc3O88196 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.17■□□□□ 0.82
Ttc3O88196 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc3O88196 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.16■□□□□ 0.82
Ttc3O88196 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ttc3O88196 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc3O88196 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ttc3O88196 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Ttc3O88196 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc3O88196 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc3O88196 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc3O88196 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc3O88196 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc3O88196 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.15■□□□□ 0.82
Ttc3O88196 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc3O88196 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ttc3O88196 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ttc3O88196 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc3O88196 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc3O88196 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc3O88196 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ttc3O88196 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ttc3O88196 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc3O88196 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc3O88196 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
Ttc3O88196 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ttc3O88196 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ttc3O88196 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc3O88196 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc3O88196 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc3O88196 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc3O88196 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ttc3O88196 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc3O88196 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc3O88196 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc3O88196 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc3O88196 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.14■□□□□ 0.81
Ttc3O88196 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc3O88196 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc3O88196 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
Ttc3O88196 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ttc3O88196 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc3O88196 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ttc3O88196 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.13■□□□□ 0.81
Ttc3O88196 Gm20049-201ENSMUST00000219950 730 ntBASIC20.13■□□□□ 0.81
Ttc3O88196 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc3O88196 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc3O88196 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ttc3O88196 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc3O88196 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc3O88196 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms