Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim1O70400 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.9■□□□□ 0.62
Pdlim1O70400 Gm13234-201ENSMUST00000120010 747 ntBASIC18.9■□□□□ 0.62
Pdlim1O70400 Gm42778-201ENSMUST00000199644 553 ntBASIC18.9■□□□□ 0.62
Pdlim1O70400 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim1O70400 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim1O70400 Reep4-203ENSMUST00000226563 1444 ntBASIC18.9■□□□□ 0.62
Pdlim1O70400 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim1O70400 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim1O70400 Golph3-202ENSMUST00000226517 2359 ntBASIC18.89■□□□□ 0.61
Pdlim1O70400 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.89■□□□□ 0.61
Pdlim1O70400 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim1O70400 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Pdlim1O70400 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.88■□□□□ 0.61
Pdlim1O70400 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.88■□□□□ 0.61
Pdlim1O70400 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
Pdlim1O70400 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim1O70400 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim1O70400 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim1O70400 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim1O70400 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
Pdlim1O70400 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pdlim1O70400 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim1O70400 Gm38205-201ENSMUST00000192243 258 ntBASIC18.87■□□□□ 0.61
Pdlim1O70400 Gm42642-201ENSMUST00000200683 355 ntBASIC18.87■□□□□ 0.61
Pdlim1O70400 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.87■□□□□ 0.61
Pdlim1O70400 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim1O70400 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.87■□□□□ 0.61
Pdlim1O70400 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim1O70400 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim1O70400 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Pdlim1O70400 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim1O70400 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim1O70400 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim1O70400 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pdlim1O70400 Gm13146-201ENSMUST00000118508 780 ntBASIC18.86■□□□□ 0.61
Pdlim1O70400 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.86■□□□□ 0.61
Pdlim1O70400 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim1O70400 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim1O70400 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim1O70400 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pdlim1O70400 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim1O70400 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pdlim1O70400 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pdlim1O70400 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.85■□□□□ 0.61
Pdlim1O70400 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pdlim1O70400 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pdlim1O70400 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim1O70400 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim1O70400 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim1O70400 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim1O70400 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pdlim1O70400 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.84■□□□□ 0.61
Pdlim1O70400 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim1O70400 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim1O70400 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim1O70400 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Pdlim1O70400 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim1O70400 Gm10033-202ENSMUST00000211874 928 ntBASIC18.83■□□□□ 0.6
Pdlim1O70400 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim1O70400 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim1O70400 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pdlim1O70400 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim1O70400 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim1O70400 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim1O70400 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim1O70400 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.82■□□□□ 0.6
Pdlim1O70400 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim1O70400 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.82■□□□□ 0.6
Pdlim1O70400 Gm18671-201ENSMUST00000214826 683 ntBASIC18.82■□□□□ 0.6
Pdlim1O70400 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim1O70400 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.82■□□□□ 0.6
Pdlim1O70400 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim1O70400 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim1O70400 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pdlim1O70400 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.81■□□□□ 0.6
Pdlim1O70400 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms