Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl35aO55142 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rpl35aO55142 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.23□□□□□ -0.13
Rpl35aO55142 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl35aO55142 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.23□□□□□ -0.13
Rpl35aO55142 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.23□□□□□ -0.13
Rpl35aO55142 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.23□□□□□ -0.13
Rpl35aO55142 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl35aO55142 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl35aO55142 Notumos-201ENSMUST00000151998 2659 ntBASIC14.23□□□□□ -0.13
Rpl35aO55142 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Rpl35aO55142 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl35aO55142 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl35aO55142 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.23□□□□□ -0.13
Rpl35aO55142 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rpl35aO55142 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl35aO55142 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl35aO55142 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl35aO55142 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl35aO55142 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl35aO55142 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl35aO55142 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl35aO55142 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.22□□□□□ -0.13
Rpl35aO55142 Gm42778-201ENSMUST00000199644 553 ntBASIC14.22□□□□□ -0.13
Rpl35aO55142 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.22□□□□□ -0.13
Rpl35aO55142 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rpl35aO55142 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl35aO55142 Gm10493-201ENSMUST00000097270 612 ntBASIC14.22□□□□□ -0.13
Rpl35aO55142 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl35aO55142 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.22□□□□□ -0.13
Rpl35aO55142 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl35aO55142 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl35aO55142 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl35aO55142 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl35aO55142 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.21□□□□□ -0.13
Rpl35aO55142 Gm27801-201ENSMUST00000184174 223 ntBASIC14.21□□□□□ -0.13
Rpl35aO55142 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.21□□□□□ -0.13
Rpl35aO55142 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl35aO55142 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl35aO55142 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl35aO55142 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl35aO55142 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rpl35aO55142 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpl35aO55142 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpl35aO55142 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Rpl35aO55142 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpl35aO55142 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpl35aO55142 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.2□□□□□ -0.14
Rpl35aO55142 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.2□□□□□ -0.14
Rpl35aO55142 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Rpl35aO55142 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl35aO55142 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rpl35aO55142 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Rpl35aO55142 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rpl35aO55142 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpl35aO55142 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Rpl35aO55142 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.19□□□□□ -0.14
Rpl35aO55142 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl35aO55142 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.18□□□□□ -0.14
Rpl35aO55142 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rpl35aO55142 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.18□□□□□ -0.14
Rpl35aO55142 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.18□□□□□ -0.14
Rpl35aO55142 Gm42642-201ENSMUST00000200683 355 ntBASIC14.18□□□□□ -0.14
Rpl35aO55142 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rpl35aO55142 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.18□□□□□ -0.14
Rpl35aO55142 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rpl35aO55142 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl35aO55142 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms