Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl13O55038 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cxcl13O55038 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl13O55038 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl13O55038 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl13O55038 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl13O55038 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl13O55038 Gm7290-201ENSMUST00000104990 617 ntBASIC16.21■□□□□ 0.19
Cxcl13O55038 Gm12918-201ENSMUST00000120234 636 ntBASIC16.21■□□□□ 0.19
Cxcl13O55038 Gm15710-201ENSMUST00000121821 636 ntBASIC16.21■□□□□ 0.19
Cxcl13O55038 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.21■□□□□ 0.19
Cxcl13O55038 Gm5075-201ENSMUST00000196916 622 ntBASIC16.21■□□□□ 0.19
Cxcl13O55038 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.21■□□□□ 0.19
Cxcl13O55038 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.21■□□□□ 0.19
Cxcl13O55038 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cxcl13O55038 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cxcl13O55038 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cxcl13O55038 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl13O55038 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl13O55038 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl13O55038 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl13O55038 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.2■□□□□ 0.18
Cxcl13O55038 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.2■□□□□ 0.18
Cxcl13O55038 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.2■□□□□ 0.18
Cxcl13O55038 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl13O55038 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl13O55038 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl13O55038 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl13O55038 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Cxcl13O55038 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.19■□□□□ 0.18
Cxcl13O55038 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cxcl13O55038 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.19■□□□□ 0.18
Cxcl13O55038 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.19■□□□□ 0.18
Cxcl13O55038 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cxcl13O55038 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Cxcl13O55038 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Cxcl13O55038 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl13O55038 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cxcl13O55038 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cxcl13O55038 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl13O55038 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl13O55038 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.18■□□□□ 0.18
Cxcl13O55038 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl13O55038 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl13O55038 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cxcl13O55038 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl13O55038 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.17■□□□□ 0.18
Cxcl13O55038 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Gm27011-201ENSMUST00000182352 972 ntBASIC16.17■□□□□ 0.18
Cxcl13O55038 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.17■□□□□ 0.18
Cxcl13O55038 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cxcl13O55038 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.17■□□□□ 0.18
Cxcl13O55038 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cxcl13O55038 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl13O55038 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cxcl13O55038 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cxcl13O55038 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.16■□□□□ 0.18
Cxcl13O55038 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl13O55038 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cxcl13O55038 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl13O55038 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl13O55038 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl13O55038 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cxcl13O55038 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl13O55038 Gm13148-201ENSMUST00000118892 745 ntBASIC16.15■□□□□ 0.18
Cxcl13O55038 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl13O55038 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.15■□□□□ 0.18
Cxcl13O55038 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms