Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SpibO35906 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SpibO35906 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SpibO35906 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.27■■□□□ 1
SpibO35906 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.27■■□□□ 1
SpibO35906 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SpibO35906 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.27■■□□□ 1
SpibO35906 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SpibO35906 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SpibO35906 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SpibO35906 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SpibO35906 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SpibO35906 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.26■□□□□ 0.99
SpibO35906 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SpibO35906 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.26■□□□□ 0.99
SpibO35906 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SpibO35906 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SpibO35906 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.26■□□□□ 0.99
SpibO35906 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.26■□□□□ 0.99
SpibO35906 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SpibO35906 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SpibO35906 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SpibO35906 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SpibO35906 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SpibO35906 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.26■□□□□ 0.99
SpibO35906 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SpibO35906 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SpibO35906 Gm13168-201ENSMUST00000121771 632 ntBASIC21.25■□□□□ 0.99
SpibO35906 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SpibO35906 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SpibO35906 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SpibO35906 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SpibO35906 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SpibO35906 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
SpibO35906 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SpibO35906 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SpibO35906 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SpibO35906 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SpibO35906 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Gm10252-201ENSMUST00000209541 832 ntBASIC21.22■□□□□ 0.99
SpibO35906 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SpibO35906 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.22■□□□□ 0.99
SpibO35906 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SpibO35906 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SpibO35906 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SpibO35906 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SpibO35906 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SpibO35906 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SpibO35906 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SpibO35906 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SpibO35906 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SpibO35906 Trmt13-210ENSMUST00000198454 880 ntBASIC21.21■□□□□ 0.99
SpibO35906 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.21■□□□□ 0.99
SpibO35906 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.21■□□□□ 0.99
SpibO35906 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.21■□□□□ 0.99
SpibO35906 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SpibO35906 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SpibO35906 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SpibO35906 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.21■□□□□ 0.99
SpibO35906 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SpibO35906 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SpibO35906 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SpibO35906 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SpibO35906 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SpibO35906 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SpibO35906 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SpibO35906 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.2■□□□□ 0.98
SpibO35906 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SpibO35906 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SpibO35906 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SpibO35906 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.2■□□□□ 0.98
SpibO35906 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SpibO35906 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SpibO35906 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SpibO35906 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.19■□□□□ 0.98
SpibO35906 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SpibO35906 Gm27275-201ENSMUST00000184318 272 ntBASIC21.19■□□□□ 0.98
SpibO35906 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.19■□□□□ 0.98
SpibO35906 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SpibO35906 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.19■□□□□ 0.98
SpibO35906 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms