Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capn1O35350 Gm9988-201ENSMUST00000069786 435 ntBASIC17.64■□□□□ 0.41
Capn1O35350 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.64■□□□□ 0.41
Capn1O35350 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Capn1O35350 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Capn1O35350 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capn1O35350 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Capn1O35350 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.63■□□□□ 0.41
Capn1O35350 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Gm27801-201ENSMUST00000184174 223 ntBASIC17.63■□□□□ 0.41
Capn1O35350 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.63■□□□□ 0.41
Capn1O35350 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capn1O35350 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Capn1O35350 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.62■□□□□ 0.41
Capn1O35350 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.62■□□□□ 0.41
Capn1O35350 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Capn1O35350 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capn1O35350 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Capn1O35350 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capn1O35350 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capn1O35350 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capn1O35350 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Capn1O35350 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.61■□□□□ 0.41
Capn1O35350 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Capn1O35350 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Capn1O35350 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Capn1O35350 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.61■□□□□ 0.41
Capn1O35350 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Capn1O35350 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Capn1O35350 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Capn1O35350 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Capn1O35350 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Gm13234-201ENSMUST00000120010 747 ntBASIC17.6■□□□□ 0.41
Capn1O35350 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Capn1O35350 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Capn1O35350 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.6■□□□□ 0.41
Capn1O35350 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Capn1O35350 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Capn1O35350 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Capn1O35350 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Capn1O35350 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Capn1O35350 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Capn1O35350 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Capn1O35350 Reep4-203ENSMUST00000226563 1444 ntBASIC17.59■□□□□ 0.41
Capn1O35350 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.59■□□□□ 0.41
Capn1O35350 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.59■□□□□ 0.41
Capn1O35350 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.59■□□□□ 0.41
Capn1O35350 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Capn1O35350 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Capn1O35350 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Capn1O35350 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Capn1O35350 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Capn1O35350 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Capn1O35350 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Capn1O35350 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Capn1O35350 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Capn1O35350 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.58■□□□□ 0.41
Capn1O35350 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Capn1O35350 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Capn1O35350 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Capn1O35350 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Capn1O35350 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Capn1O35350 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Capn1O35350 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.58■□□□□ 0.4
Capn1O35350 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.58■□□□□ 0.4
Capn1O35350 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Capn1O35350 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.58■□□□□ 0.4
Capn1O35350 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Capn1O35350 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Capn1O35350 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Capn1O35350 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Capn1O35350 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Capn1O35350 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.57■□□□□ 0.4
Capn1O35350 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms