Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.82■□□□□ 0.6
Bhlhe40O35185 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Bhlhe40O35185 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.82■□□□□ 0.6
Bhlhe40O35185 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.82■□□□□ 0.6
Bhlhe40O35185 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.82■□□□□ 0.6
Bhlhe40O35185 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Bhlhe40O35185 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.81■□□□□ 0.6
Bhlhe40O35185 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Bhlhe40O35185 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
Bhlhe40O35185 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Bhlhe40O35185 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Bhlhe40O35185 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.81■□□□□ 0.6
Bhlhe40O35185 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.81■□□□□ 0.6
Bhlhe40O35185 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Bhlhe40O35185 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Bhlhe40O35185 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Bhlhe40O35185 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Bhlhe40O35185 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Bhlhe40O35185 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Bhlhe40O35185 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.8■□□□□ 0.6
Bhlhe40O35185 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Bhlhe40O35185 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Bhlhe40O35185 Gm6365-201ENSMUST00000054711 744 ntBASIC18.8■□□□□ 0.6
Bhlhe40O35185 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Bhlhe40O35185 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.8■□□□□ 0.6
Bhlhe40O35185 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Bhlhe40O35185 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Bhlhe40O35185 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Bhlhe40O35185 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Bhlhe40O35185 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.79■□□□□ 0.6
Bhlhe40O35185 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Bhlhe40O35185 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Bhlhe40O35185 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Bhlhe40O35185 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Bhlhe40O35185 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Bhlhe40O35185 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Bhlhe40O35185 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Gm13148-201ENSMUST00000118892 745 ntBASIC18.78■□□□□ 0.6
Bhlhe40O35185 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Bhlhe40O35185 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.78■□□□□ 0.6
Bhlhe40O35185 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bhlhe40O35185 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bhlhe40O35185 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Bhlhe40O35185 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Bhlhe40O35185 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.77■□□□□ 0.6
Bhlhe40O35185 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Bhlhe40O35185 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Bhlhe40O35185 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Bhlhe40O35185 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Bhlhe40O35185 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Bhlhe40O35185 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Bhlhe40O35185 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.77■□□□□ 0.59
Bhlhe40O35185 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Bhlhe40O35185 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bhlhe40O35185 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bhlhe40O35185 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.76■□□□□ 0.59
Bhlhe40O35185 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Bhlhe40O35185 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bhlhe40O35185 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bhlhe40O35185 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.75■□□□□ 0.59
Bhlhe40O35185 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bhlhe40O35185 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Bhlhe40O35185 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Bhlhe40O35185 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Bhlhe40O35185 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Bhlhe40O35185 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms