Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
OtpO09113 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.01■□□□□ 0.31
OtpO09113 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.01■□□□□ 0.31
OtpO09113 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.01■□□□□ 0.31
OtpO09113 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
OtpO09113 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
OtpO09113 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
OtpO09113 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
OtpO09113 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
OtpO09113 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
OtpO09113 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
OtpO09113 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
OtpO09113 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
OtpO09113 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.01■□□□□ 0.31
OtpO09113 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
OtpO09113 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17■□□□□ 0.31
OtpO09113 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17■□□□□ 0.31
OtpO09113 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
OtpO09113 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17■□□□□ 0.31
OtpO09113 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
OtpO09113 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
OtpO09113 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
OtpO09113 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
OtpO09113 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
OtpO09113 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
OtpO09113 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17■□□□□ 0.31
OtpO09113 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
OtpO09113 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.99■□□□□ 0.31
OtpO09113 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
OtpO09113 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
OtpO09113 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
OtpO09113 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
OtpO09113 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
OtpO09113 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
OtpO09113 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
OtpO09113 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.98■□□□□ 0.31
OtpO09113 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
OtpO09113 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.98■□□□□ 0.31
OtpO09113 Mir7075-201ENSMUST00000184187 82 ntBASIC16.98■□□□□ 0.31
OtpO09113 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
OtpO09113 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OtpO09113 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.97■□□□□ 0.31
OtpO09113 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
OtpO09113 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OtpO09113 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
OtpO09113 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
OtpO09113 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
OtpO09113 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
OtpO09113 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OtpO09113 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.97■□□□□ 0.31
OtpO09113 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OtpO09113 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OtpO09113 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OtpO09113 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.97■□□□□ 0.31
OtpO09113 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.97■□□□□ 0.31
OtpO09113 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.97■□□□□ 0.31
OtpO09113 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OtpO09113 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.97■□□□□ 0.31
OtpO09113 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.96■□□□□ 0.31
OtpO09113 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.96■□□□□ 0.31
OtpO09113 Gm27454-201ENSMUST00000185090 204 ntBASIC16.96■□□□□ 0.31
OtpO09113 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
OtpO09113 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
OtpO09113 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
OtpO09113 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
OtpO09113 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
OtpO09113 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
OtpO09113 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
OtpO09113 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.95■□□□□ 0.3
OtpO09113 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
OtpO09113 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
OtpO09113 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
OtpO09113 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
OtpO09113 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
OtpO09113 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms