Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trove2O08848 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trove2O08848 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trove2O08848 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trove2O08848 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trove2O08848 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trove2O08848 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trove2O08848 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trove2O08848 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trove2O08848 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trove2O08848 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trove2O08848 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.53■□□□□ 0.72
Trove2O08848 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.53■□□□□ 0.72
Trove2O08848 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trove2O08848 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trove2O08848 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trove2O08848 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trove2O08848 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trove2O08848 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trove2O08848 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trove2O08848 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trove2O08848 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trove2O08848 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trove2O08848 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trove2O08848 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trove2O08848 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.52■□□□□ 0.72
Trove2O08848 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.52■□□□□ 0.72
Trove2O08848 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.52■□□□□ 0.72
Trove2O08848 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trove2O08848 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.52■□□□□ 0.72
Trove2O08848 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trove2O08848 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trove2O08848 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trove2O08848 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trove2O08848 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trove2O08848 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.52■□□□□ 0.71
Trove2O08848 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.51■□□□□ 0.71
Trove2O08848 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Trove2O08848 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.51■□□□□ 0.71
Trove2O08848 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trove2O08848 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trove2O08848 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Trove2O08848 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trove2O08848 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trove2O08848 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.5■□□□□ 0.71
Trove2O08848 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.5■□□□□ 0.71
Trove2O08848 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.5■□□□□ 0.71
Trove2O08848 Gm43530-201ENSMUST00000195920 274 ntBASIC19.5■□□□□ 0.71
Trove2O08848 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trove2O08848 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trove2O08848 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trove2O08848 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trove2O08848 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trove2O08848 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trove2O08848 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trove2O08848 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Trove2O08848 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.48■□□□□ 0.71
Trove2O08848 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.48■□□□□ 0.71
Trove2O08848 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trove2O08848 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trove2O08848 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.47■□□□□ 0.71
Trove2O08848 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trove2O08848 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trove2O08848 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trove2O08848 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trove2O08848 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trove2O08848 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms