Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.16■□□□□ 0.5
Sh3yl1O08641 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3yl1O08641 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3yl1O08641 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3yl1O08641 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3yl1O08641 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3yl1O08641 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.14■□□□□ 0.49
Sh3yl1O08641 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3yl1O08641 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Sh3yl1O08641 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3yl1O08641 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sh3yl1O08641 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3yl1O08641 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3yl1O08641 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3yl1O08641 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3yl1O08641 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Gm18284-201ENSMUST00000172604 624 ntBASIC18.12■□□□□ 0.49
Sh3yl1O08641 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.12■□□□□ 0.49
Sh3yl1O08641 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3yl1O08641 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sh3yl1O08641 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3yl1O08641 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sh3yl1O08641 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Sh3yl1O08641 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.11■□□□□ 0.49
Sh3yl1O08641 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3yl1O08641 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Sh3yl1O08641 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3yl1O08641 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.11■□□□□ 0.49
Sh3yl1O08641 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sh3yl1O08641 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3yl1O08641 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.09■□□□□ 0.49
Sh3yl1O08641 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3yl1O08641 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms