Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Gm27801-201ENSMUST00000184174 223 ntBASIC16.92■□□□□ 0.3
Raet1bO08603 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1bO08603 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Raet1bO08603 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1bO08603 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1bO08603 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1bO08603 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Raet1bO08603 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Raet1bO08603 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.91■□□□□ 0.3
Raet1bO08603 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.91■□□□□ 0.3
Raet1bO08603 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1bO08603 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Raet1bO08603 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.9■□□□□ 0.3
Raet1bO08603 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.9■□□□□ 0.3
Raet1bO08603 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1bO08603 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Raet1bO08603 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Raet1bO08603 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1bO08603 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1bO08603 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1bO08603 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1bO08603 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1bO08603 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1bO08603 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Raet1bO08603 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1bO08603 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.9■□□□□ 0.3
Raet1bO08603 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Raet1bO08603 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Raet1bO08603 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Raet1bO08603 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1bO08603 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1bO08603 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Raet1bO08603 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1bO08603 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1bO08603 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.89■□□□□ 0.29
Raet1bO08603 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Raet1bO08603 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1bO08603 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Raet1bO08603 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1bO08603 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1bO08603 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Raet1bO08603 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.88■□□□□ 0.29
Raet1bO08603 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.88■□□□□ 0.29
Raet1bO08603 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Raet1bO08603 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.88■□□□□ 0.29
Raet1bO08603 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Raet1bO08603 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.88■□□□□ 0.29
Raet1bO08603 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1bO08603 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Raet1bO08603 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Raet1bO08603 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.87■□□□□ 0.29
Raet1bO08603 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.87■□□□□ 0.29
Raet1bO08603 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Raet1bO08603 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Raet1bO08603 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Raet1bO08603 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1bO08603 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1bO08603 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Raet1bO08603 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1bO08603 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1bO08603 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1bO08603 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1bO08603 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Raet1bO08603 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.86■□□□□ 0.29
Raet1bO08603 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1bO08603 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1bO08603 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms