Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Gm44549-201ENSMUST00000208351 577 ntBASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
B020004C17RikJ3QP07 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.56■■□□□ 1.04
B020004C17RikJ3QP07 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
B020004C17RikJ3QP07 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.56■■□□□ 1.04
B020004C17RikJ3QP07 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
B020004C17RikJ3QP07 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
B020004C17RikJ3QP07 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
B020004C17RikJ3QP07 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
B020004C17RikJ3QP07 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Gm18666-201ENSMUST00000190039 958 ntBASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
B020004C17RikJ3QP07 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
B020004C17RikJ3QP07 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.52■■□□□ 1.03
B020004C17RikJ3QP07 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 Gm11249-201ENSMUST00000117071 859 ntBASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
B020004C17RikJ3QP07 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
B020004C17RikJ3QP07 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.5■■□□□ 1.03
B020004C17RikJ3QP07 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
B020004C17RikJ3QP07 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
B020004C17RikJ3QP07 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
B020004C17RikJ3QP07 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
B020004C17RikJ3QP07 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
B020004C17RikJ3QP07 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
B020004C17RikJ3QP07 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
B020004C17RikJ3QP07 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.49■■□□□ 1.03
B020004C17RikJ3QP07 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
B020004C17RikJ3QP07 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
B020004C17RikJ3QP07 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
B020004C17RikJ3QP07 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
B020004C17RikJ3QP07 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
B020004C17RikJ3QP07 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
B020004C17RikJ3QP07 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
B020004C17RikJ3QP07 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms