Protein–RNA interactions for Protein: J3KMS0

Gm21411, Predicted gene, 21411, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21411J3KMS0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21411J3KMS0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Gm40848-201ENSMUST00000221998 324 ntBASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21411J3KMS0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21411J3KMS0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21411J3KMS0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21411J3KMS0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Gm27801-201ENSMUST00000184174 223 ntBASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21411J3KMS0 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.09■□□□□ 0.33
Gm21411J3KMS0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21411J3KMS0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Gm21411J3KMS0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms