Protein–RNA interactions for Protein: F6RFI0

Gm9887, Predicted gene 9887, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9887F6RFI0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Smad6-203ENSMUST00000179458 273 ntBASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm9887F6RFI0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.6□□□□□ -0.23
Gm9887F6RFI0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Gm8493-201ENSMUST00000196881 489 ntBASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm9887F6RFI0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Gm6139-201ENSMUST00000079261 882 ntBASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm9887F6RFI0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm9887F6RFI0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm9887F6RFI0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm9887F6RFI0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Gm45417-201ENSMUST00000209533 758 ntBASIC13.57□□□□□ -0.24
Gm9887F6RFI0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC13.57□□□□□ -0.24
Gm9887F6RFI0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Gm11421-201ENSMUST00000122124 294 ntBASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Gm9887F6RFI0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm9887F6RFI0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms