Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ccdc141E9Q8Q6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC29.17■■■□□ 2.26
Ccdc141E9Q8Q6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC29.17■■■□□ 2.26
Ccdc141E9Q8Q6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ccdc141E9Q8Q6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Ccdc141E9Q8Q6 Gm43672-201ENSMUST00000199072 1731 ntBASIC29.17■■■□□ 2.26
Ccdc141E9Q8Q6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 Mir1199-201ENSMUST00000117015 119 ntBASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc141E9Q8Q6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ccdc141E9Q8Q6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ccdc141E9Q8Q6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ccdc141E9Q8Q6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
Ccdc141E9Q8Q6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
Ccdc141E9Q8Q6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.25
Ccdc141E9Q8Q6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
Ccdc141E9Q8Q6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ccdc141E9Q8Q6 Gm12504-201ENSMUST00000120860 2231 ntBASIC29.12■■■□□ 2.25
Ccdc141E9Q8Q6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC29.12■■■□□ 2.25
Ccdc141E9Q8Q6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC29.12■■■□□ 2.25
Ccdc141E9Q8Q6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Ccdc141E9Q8Q6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Ccdc141E9Q8Q6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ccdc141E9Q8Q6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Ccdc141E9Q8Q6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ccdc141E9Q8Q6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ccdc141E9Q8Q6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ccdc141E9Q8Q6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
Ccdc141E9Q8Q6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ccdc141E9Q8Q6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ccdc141E9Q8Q6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC29.11■■■□□ 2.25
Ccdc141E9Q8Q6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC29.11■■■□□ 2.25
Ccdc141E9Q8Q6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ccdc141E9Q8Q6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ccdc141E9Q8Q6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ccdc141E9Q8Q6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ccdc141E9Q8Q6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ccdc141E9Q8Q6 Mir5122-201ENSMUST00000175004 89 ntBASIC29.09■■■□□ 2.25
Ccdc141E9Q8Q6 Gm32699-201ENSMUST00000221728 1988 ntBASIC29.09■■■□□ 2.25
Ccdc141E9Q8Q6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC29.08■■■□□ 2.25
Ccdc141E9Q8Q6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ccdc141E9Q8Q6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Ccdc141E9Q8Q6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC29.08■■■□□ 2.25
Ccdc141E9Q8Q6 Gm15378-201ENSMUST00000121894 207 ntBASIC29.08■■■□□ 2.25
Ccdc141E9Q8Q6 Gm13158-201ENSMUST00000122007 736 ntBASIC29.08■■■□□ 2.25
Ccdc141E9Q8Q6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ccdc141E9Q8Q6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ccdc141E9Q8Q6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ccdc141E9Q8Q6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Ccdc141E9Q8Q6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC29.07■■■□□ 2.24
Ccdc141E9Q8Q6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms