Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ube4aE9Q735 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ube4aE9Q735 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ube4aE9Q735 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ube4aE9Q735 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ube4aE9Q735 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.15■■□□□ 1.3
Ube4aE9Q735 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ube4aE9Q735 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ube4aE9Q735 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC23.14■■□□□ 1.29
Ube4aE9Q735 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.13■■□□□ 1.29
Ube4aE9Q735 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Rab3c-203ENSMUST00000224180 967 ntBASIC23.13■■□□□ 1.29
Ube4aE9Q735 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ube4aE9Q735 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Ube4aE9Q735 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.12■■□□□ 1.29
Ube4aE9Q735 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.12■■□□□ 1.29
Ube4aE9Q735 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC23.12■■□□□ 1.29
Ube4aE9Q735 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ube4aE9Q735 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.12■■□□□ 1.29
Ube4aE9Q735 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ube4aE9Q735 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ube4aE9Q735 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ube4aE9Q735 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ube4aE9Q735 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ube4aE9Q735 Gm22240-201ENSMUST00000175225 82 ntBASIC23.11■■□□□ 1.29
Ube4aE9Q735 Gm8520-201ENSMUST00000186517 868 ntBASIC23.11■■□□□ 1.29
Ube4aE9Q735 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ube4aE9Q735 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ube4aE9Q735 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.11■■□□□ 1.29
Ube4aE9Q735 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ube4aE9Q735 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ube4aE9Q735 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.1■■□□□ 1.29
Ube4aE9Q735 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ube4aE9Q735 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ube4aE9Q735 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ube4aE9Q735 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ube4aE9Q735 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ube4aE9Q735 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ube4aE9Q735 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ube4aE9Q735 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ube4aE9Q735 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
Ube4aE9Q735 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Ube4aE9Q735 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ube4aE9Q735 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.08■■□□□ 1.29
Ube4aE9Q735 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ube4aE9Q735 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ube4aE9Q735 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.08■■□□□ 1.29
Ube4aE9Q735 Gm37856-201ENSMUST00000191634 999 ntBASIC23.08■■□□□ 1.29
Ube4aE9Q735 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.08■■□□□ 1.29
Ube4aE9Q735 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ube4aE9Q735 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ube4aE9Q735 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Ube4aE9Q735 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ube4aE9Q735 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Ube4aE9Q735 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ube4aE9Q735 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.07■■□□□ 1.28
Ube4aE9Q735 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.07■■□□□ 1.28
Ube4aE9Q735 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ube4aE9Q735 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ube4aE9Q735 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ube4aE9Q735 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ube4aE9Q735 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Ube4aE9Q735 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ube4aE9Q735 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ube4aE9Q735 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ube4aE9Q735 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.07■■□□□ 1.28
Ube4aE9Q735 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Ube4aE9Q735 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ube4aE9Q735 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ube4aE9Q735 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ube4aE9Q735 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms