Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cntnap3E9PY62 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.18■□□□□ 0.98
Cntnap3E9PY62 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cntnap3E9PY62 Gm25925-201ENSMUST00000158314 306 ntBASIC21.18■□□□□ 0.98
Cntnap3E9PY62 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cntnap3E9PY62 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cntnap3E9PY62 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cntnap3E9PY62 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cntnap3E9PY62 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cntnap3E9PY62 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.17■□□□□ 0.98
Cntnap3E9PY62 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cntnap3E9PY62 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.17■□□□□ 0.98
Cntnap3E9PY62 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cntnap3E9PY62 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
Cntnap3E9PY62 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cntnap3E9PY62 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.15■□□□□ 0.98
Cntnap3E9PY62 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.15■□□□□ 0.98
Cntnap3E9PY62 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cntnap3E9PY62 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cntnap3E9PY62 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cntnap3E9PY62 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cntnap3E9PY62 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cntnap3E9PY62 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cntnap3E9PY62 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.14■□□□□ 0.97
Cntnap3E9PY62 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.14■□□□□ 0.97
Cntnap3E9PY62 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cntnap3E9PY62 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.14■□□□□ 0.97
Cntnap3E9PY62 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cntnap3E9PY62 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cntnap3E9PY62 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cntnap3E9PY62 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cntnap3E9PY62 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.12■□□□□ 0.97
Cntnap3E9PY62 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cntnap3E9PY62 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Cntnap3E9PY62 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.12■□□□□ 0.97
Cntnap3E9PY62 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cntnap3E9PY62 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cntnap3E9PY62 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cntnap3E9PY62 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.12■□□□□ 0.97
Cntnap3E9PY62 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cntnap3E9PY62 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cntnap3E9PY62 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cntnap3E9PY62 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.11■□□□□ 0.97
Cntnap3E9PY62 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cntnap3E9PY62 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cntnap3E9PY62 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cntnap3E9PY62 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cntnap3E9PY62 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cntnap3E9PY62 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.09■□□□□ 0.97
Cntnap3E9PY62 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cntnap3E9PY62 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cntnap3E9PY62 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.08■□□□□ 0.97
Cntnap3E9PY62 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cntnap3E9PY62 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.08■□□□□ 0.97
Cntnap3E9PY62 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cntnap3E9PY62 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cntnap3E9PY62 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cntnap3E9PY62 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms