Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ift140E9PY46 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Ift140E9PY46 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ift140E9PY46 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Ift140E9PY46 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ift140E9PY46 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Ift140E9PY46 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ift140E9PY46 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ift140E9PY46 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ift140E9PY46 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ift140E9PY46 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ift140E9PY46 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
Ift140E9PY46 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Ift140E9PY46 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ift140E9PY46 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC30.8■■■□□ 2.52
Ift140E9PY46 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ift140E9PY46 Gm26971-201ENSMUST00000182423 1072 ntBASIC30.8■■■□□ 2.52
Ift140E9PY46 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC30.8■■■□□ 2.52
Ift140E9PY46 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC30.79■■■□□ 2.52
Ift140E9PY46 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ift140E9PY46 Cdkn3-203ENSMUST00000227149 1952 ntBASIC30.78■■■□□ 2.52
Ift140E9PY46 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ift140E9PY46 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ift140E9PY46 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ift140E9PY46 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC30.77■■■□□ 2.52
Ift140E9PY46 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ift140E9PY46 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC30.77■■■□□ 2.52
Ift140E9PY46 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ift140E9PY46 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ift140E9PY46 Gm43672-201ENSMUST00000199072 1731 ntBASIC30.77■■■□□ 2.52
Ift140E9PY46 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ift140E9PY46 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ift140E9PY46 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
Ift140E9PY46 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Ift140E9PY46 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Ift140E9PY46 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC30.76■■■□□ 2.52
Ift140E9PY46 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC30.76■■■□□ 2.51
Ift140E9PY46 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Ift140E9PY46 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ift140E9PY46 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ift140E9PY46 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ift140E9PY46 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC30.75■■■□□ 2.51
Ift140E9PY46 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ift140E9PY46 Gm21814-202ENSMUST00000203277 873 ntBASIC30.75■■■□□ 2.51
Ift140E9PY46 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Ift140E9PY46 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ift140E9PY46 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ift140E9PY46 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ift140E9PY46 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC30.74■■■□□ 2.51
Ift140E9PY46 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Ift140E9PY46 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ift140E9PY46 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ift140E9PY46 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ift140E9PY46 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ift140E9PY46 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ift140E9PY46 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ift140E9PY46 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ift140E9PY46 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ift140E9PY46 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ift140E9PY46 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ift140E9PY46 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC30.71■■■□□ 2.51
Ift140E9PY46 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ift140E9PY46 Alkbh1-212ENSMUST00000185301 408 ntBASIC30.71■■■□□ 2.51
Ift140E9PY46 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ift140E9PY46 AC140264.2-202ENSMUST00000218746 817 ntBASIC30.71■■■□□ 2.51
Ift140E9PY46 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ift140E9PY46 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Ift140E9PY46 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Ift140E9PY46 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Ift140E9PY46 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Ift140E9PY46 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
Ift140E9PY46 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Ift140E9PY46 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC30.7■■■□□ 2.5
Ift140E9PY46 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
Ift140E9PY46 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Ift140E9PY46 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ift140E9PY46 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Ift140E9PY46 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC30.68■■■□□ 2.5
Ift140E9PY46 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
Ift140E9PY46 Gm27741-201ENSMUST00000185060 237 ntBASIC30.68■■■□□ 2.5
Ift140E9PY46 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ift140E9PY46 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ift140E9PY46 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ift140E9PY46 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC30.68■■■□□ 2.5
Ift140E9PY46 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ift140E9PY46 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ift140E9PY46 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
Ift140E9PY46 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Ift140E9PY46 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ift140E9PY46 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Ift140E9PY46 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Ift140E9PY46 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Ift140E9PY46 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Ift140E9PY46 Wnt10b-205ENSMUST00000226846 1204 ntBASIC30.66■■■□□ 2.5
Ift140E9PY46 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC30.66■■■□□ 2.5
Ift140E9PY46 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ift140E9PY46 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Ift140E9PY46 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Ift140E9PY46 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Ift140E9PY46 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms